Failure during collective

Sanjiv_T_ — Fri, 05 Jun 2015 04:49:27 GMT

Hi ,

I have compiled espresso with intel mpi and MKL library but getting error Failure during collective error when ever it is working fine with openmpi.

is there problem with intel mpi

Fatal error in PMPI_Bcast: Other MPI error, error stack:
PMPI_Bcast(2112)........: MPI_Bcast(buf=0x516f460, count=96, MPI_DOUBLE_PRECISION, root=4, comm=0x84000004) failed
MPIR_Bcast_impl(1670)...:
I_MPIR_Bcast_intra(1887): Failure during collective
MPIR_Bcast_intra(1524)..: Failure during collective
Fatal error in PMPI_Bcast: Other MPI error, error stack:
PMPI_Bcast(2112)........: MPI_Bcast(buf=0x5300310, count=96, MPI_DOUBLE_PRECISION, root=4, comm=0x84000004) failed
MPIR_Bcast_impl(1670)...:
I_MPIR_Bcast_intra(1887): Failure during collective
MPIR_Bcast_intra(1524)..: Failure during collective
Fatal error in PMPI_Bcast: Other MPI error, error stack:
PMPI_Bcast(2112)........: MPI_Bcast(buf=0x6b295c0, count=96, MPI_DOUBLE_PRECISION, root=4, comm=0x84000004) failed
MPIR_Bcast_impl(1670)...:
I_MPIR_Bcast_intra(1887): Failure during collective
MPIR_Bcast_intra(1524)..: Failure during collective
Fatal error in PMPI_Bcast: Other MPI error, error stack:
PMPI_Bcast(2112)........: MPI_Bcast(buf=0x67183d0, count=96, MPI_DOUBLE_PRECISION, root=4, comm=0x84000004) failed
MPIR_Bcast_impl(1670)...:
I_MPIR_Bcast_intra(1887): Failure during collective
MPIR_Bcast_intra(1524)..: Failure during collective
Fatal error in PMPI_Bcast: Other MPI error, error stack:
PMPI_Bcast(2112)........: MPI_Bcast(buf=0x4f794c0, count=96, MPI_DOUBLE_PRECISION, root=4, comm=0x84000004) failed
MPIR_Bcast_impl(1670)...:
I_MPIR_Bcast_intra(1887): Failure during collective
MPIR_Bcast_intra(1524)..: Failure during collective
[0:n125] unexpected disconnect completion event from [22:n122]
Assertion failed in file ../../dapl_conn_rc.c at line 1128: 0
internal ABORT - process 0
Fatal error in PMPI_Bcast: Other MPI error, error stack:
PMPI_Bcast(2112)........: MPI_Bcast(buf=0x56bfe30, count=96, MPI_DOUBLE_PRECISION, root=4, comm=0x84000004) failed
MPIR_Bcast_impl(1670)...:
I_MPIR_Bcast_intra(1887): Failure during collective
MPIR_Bcast_intra(1524)..: Failure during collective
/var/spool/PBS/mom_priv/epilogue: line 30: kill: (5089) - No such process

Kindly help us for resolving this

Thanks
sanjiv

Hi Sanjiv,

Ying_H_Intel — Mon, 08 Jun 2015 02:01:36 GMT

Hi Sanjiv,

Could you please provide us a small test case?

And If needed, you may post the issue to Intel Cluster Forum https://software.intel.com/en-us/forums/intel-clusters-and-hpc-technology, where Intel MPI experts may help directly.

Best Regards,

Ying

Hi Ying,

Sanjiv_T_ — Fri, 12 Jun 2015 06:56:44 GMT

Hi Ying,

Please find the attached espresso input file and pseudopotential.

Kindly help us for thins issue..

Regards

Sanjiv

Sanjiv,

James_T_Intel — Mon, 15 Jun 2015 19:43:27 GMT

Sanjiv,

What versions of Quantum Espresso, Intel® MPI Library, and Intel® Math Kernel Library are you using? I will attempt to reproduce this locally.

James.

topic Hi Sanjiv, in Intel® oneAPI Math Kernel Library

Failure during collective

Hi Sanjiv,

Hi Ying,

Sanjiv,