My main question is which switch can cause mouse click step won't work?
Since you are using old version of Quartus. You can use native link to setup the simulation. https://www.youtube.com/watch?v=PmVVXQchv2c
From there, it will show you the correct steps and you can refer to the scripts that it used.
Also, you need to turn on the netlist generation in the megawizard as well.
I would suggest you upgrade to latest release of Quartus 18.1 if the device that you use permit.