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qstat -xf job# output is unreadable

segmentation_fault
New Contributor I
251 Views

If I do "qstat -xf my_job_number" I get unreadable output. It appears to be JSON or some XML formatted output. In most clusters I have worked in the output is human readable with line breaks and tabs.

 

 

 

me@s001-n064:~/solver$ qstat -xf | grep exec
<Data><Job><Job_Id>993274.v-qsvr-1.aidevcloud</Job_Id><Job_Name>build.sh</Job_Name><Job_Owner>me@login-2.aidevcloud</Job_Owner><resources_used><cput>00:23:37</cput><energy_used>0</energy_used><mem>7957620kb</mem><vmem>28333580kb</vmem><walltime>00:06:20</walltime></resources_used><job_state>R</job_state><queue>batch</queue><server>v-qsvr-1.aidevcloud</server><Checkpoint>u</Checkpoint><ctime>1634660512</ctime><Error_Path>login-2.aidevcloud:/home/me/solver/build.sh.e993274</Error_Path><exec_host>s001-n021/0-1+s001-n064/0-1</exec_host><Hold_Types>n</Hold_Types><Join_Path>n</Join_Path><Keep_Files>n</Keep_Files><Mail_Points>n</Mail_Points><mtime>1634660513</mtime><Output_Path>login-2.aidevcloud:/home/me/solver/build.sh.o993274</Output_Path><Priority>0</Priority><qtime>1634660512</qtime><Rerunable>True</Rerunable><Resource_List><nodect>2</nodect><nodes>2:ppn=2</nodes><walltime>06:00:00</walltime></Resource_List><session_id>1071165</session_id><Variable_List>PBS_O_QUEUE=batch,PBS_O_HOME=/home/me,PBS_O_LOGNAME=me,PBS_O_PATH=/glob/development-tools/versions/ispc/ispc-v1.13.0-linux/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/vtune/2021.7.1/bin64:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/vpl/2021.6.0/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/ospray_studio/0.8.0/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/ospray/2.7.0/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/openvkl/1.0.0/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/oidn/1.4.1/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/mpi/2021.4.0//libfabric/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/mpi/2021.4.0//bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/mkl/2021.4.0/bin/intel64:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/itac/2021.4.0/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/intelpython/latest/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/intelpython/latest/condabin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/inspector/2021.4.0/bin64:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/embree/3.13.1/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/dpcpp-ct/2021.4.0/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/dev-utilities/2021.4.0/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/debugger/10.2.4/gdb/intel64/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/compiler/2021.4.0/linux/lib/oclfpga/llvm/aocl-bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/compiler/2021.4.0/linux/lib/oclfpga/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/compiler/2021.4.0/linux/bin/intel64:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/compiler/2021.4.0/linux/bin:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/clck/2021.4.0/bin/intel64:/glob/development-tools/versions/oneapi/2021.4/inteloneapi/advisor/2021.4.0/bin64:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/me/.local/bin:/home/me/bin:/bin,PBS_O_MAIL=/var/mail/me,PBS_O_SHELL=/bin/bash,PBS_O_LANG=en_US,PBS_O_SUBMIT_FILTER=/usr/local/sbin/torque_submitfilter,PBS_O_INITDIR=/home/me/solver/.,PBS_O_WORKDIR=/home/me/solver,PBS_O_HOST=login-2.aidevcloud,PBS_O_SERVER=v-qsvr-1.aidevcloud</Variable_List><euser>me</euser><egroup>me</egroup><queue_type>E</queue_type><etime>1634660512</etime><submit_args>-l nodes=2:ppn=2 -d . build.sh</submit_args><start_time>1634660513</start_time><Walltime><Remaining>21143</Remaining></Walltime><start_count>1</start_count><fault_tolerant>False</fault_tolerant><job_radix>0</job_radix><submit_host>login-2.aidevcloud</submit_host></Job></Data>

 

 

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1 Solution
JyothisV_Intel
Moderator
221 Views

Hi,

 

Thanks for posting in Intel Communities.

 

We were able to replicate this from our end. Can you try checking the job status using the following command without the -x option:

qstat -f job# | grep exec

(Replace job# with the Job ID)

 

You can read more about this here: https://devcloud.intel.com/oneapi/documentation/advanced-queue/

 

If this resolves your issue, make sure to accept this as a solution. This would help others with a similar issue.

 

Thank You!

 

Regards,

Jyothis V James

 

View solution in original post

2 Replies
JyothisV_Intel
Moderator
222 Views

Hi,

 

Thanks for posting in Intel Communities.

 

We were able to replicate this from our end. Can you try checking the job status using the following command without the -x option:

qstat -f job# | grep exec

(Replace job# with the Job ID)

 

You can read more about this here: https://devcloud.intel.com/oneapi/documentation/advanced-queue/

 

If this resolves your issue, make sure to accept this as a solution. This would help others with a similar issue.

 

Thank You!

 

Regards,

Jyothis V James

 

View solution in original post

JyothisV_Intel
Moderator
191 Views

Hi,



Thanks for accepting our solution.


If you need any additional information, please post a new question as this thread will no longer be monitored by Intel.



Regards,

Jyothis V James


Reply