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Command that works in Terminal fails in Xcode IDE

Manfredo_d_
Beginner
‎04-30-2019 05:45 AM
726 Views

I am trying with quite a lot of bumps to create a project in Xcode using the intel fortran compilers. My compilation produces some object files (and the mod files as well) but breaks at a certain file. If I paste the compilation command in the terminal the compilation seems fine. The only message I get from Xcode is 

Command /usr/local/bin/ifort-19.0.3.199 failed with exit code 2

the compilation command is 

/usr/local/bin/ifort-19.0.3.199 -arch x86_64 -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -mmacosx-version-min=10.14 -g -O0 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -parallel -assume nobuffered_io -mkl=parallel -fpp -I/Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Products/Debug/include -I/opt/intel/compilers_and_libraries_2019.3.199/mac/mkl/include -I/usr/local/hdf-1-10.5/include -I/Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/include -Difdef -noD -assume cc-omp -recursive -reentrancy threaded -nopad_source -altparam -nod-lines -qopenmp -standard-semantics -novms -nof77rtl -nointconstant -assume nobscc -stand f08 -warn nostderrors -warn declarations -warn unused -warn noignore-loc -warn notruncated-source -warn noalignments -warn uncalled -warn usage -warn nointerfaces -warn noshape -init=nosnan -init=nozero -align nosequence -assume nodummy_aliases -assume protect-constants -assume nobyterecl -fno-zero-initialized-in-bss -fp-model no-except -nofltconsistency -no-fp-port -no-ftz -nofpconstant -assume nominus0 -no-complex-limited-range -fp-stack-check -assume nounderscore -nogen-interfaces -module /Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug -traceback -check nobounds -check nooutput-conversion -check noformat -check noarg-temp-created -check nopointers -check nouninit -check stack -check noshape -ftrapuv -u -fp-stack-check -c /Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/memory/ed_state_vars.f90 -o /Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug/ED2.build/Objects-normal/x86_64/ed_state_vars.o

The file at which the compilation stops is very large (27000 lines). Apart from that it looks pretty similar to the ~10 files for which the compilation works. Also I should specify that the error is not due to the compilation order, I set it manually.

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Ron_Green
Moderator
‎04-30-2019 07:47 AM
726 Views

It is a very long command line - I wonder if Xcode is truncating it due to a character limit - maybe??

Can you try compiling everything up to that 1 file, then add in compiler option -dryrun to get a dump of everything passed to the compiler.  Then compile just that 1 source from Xcode.

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Manfredo_d_
Beginner
‎04-30-2019 07:57 AM
726 Views 
 

I don't think that it is truncated because if I open the command line and paste that exact line I can compile the .o and .mod files properly in the Xcode specific location.
Following your suggestion I appended a -dryrun flag in the build rules for that one file.
The dump from Xcode is:

CompileFortran /Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug/ED2.build/Objects-normal/x86_64/ed_state_vars.o /Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/memory/ed_state_vars.F90
    cd /Users/manfredo/Documents/Eclipse_workspace/ED2/ED2
    /usr/local/bin/ifort-19.0.3.199 -arch x86_64 -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -mmacosx-version-min=10.14 -g -O0 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -parallel -assume nobuffered_io -mkl=parallel -fpp -I/Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Products/Debug/include -I/opt/intel/compilers_and_libraries_2019.3.199/mac/mkl/include -I/usr/local/hdf-1-10.5/include -I/Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/include -Difdef -noD -assume cc-omp -recursive -reentrancy threaded -nopad_source -altparam -nod-lines -qopenmp -standard-semantics -novms -nof77rtl -nointconstant -assume nobscc -stand f08 -warn nostderrors -warn declarations -warn unused -warn noignore-loc -warn notruncated-source -warn noalignments -warn uncalled -warn usage -warn nointerfaces -warn noshape -init=nosnan -init=nozero -align nosequence -assume nodummy_aliases -assume protect-constants -assume nobyterecl -fno-zero-initialized-in-bss -fp-model no-except -nofltconsistency -no-fp-port -no-ftz -nofpconstant -assume nominus0 -no-complex-limited-range -fp-stack-check -assume nounderscore -nogen-interfaces -module /Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug -traceback -check nobounds -check nooutput-conversion -check noformat -check noarg-temp-created -check nopointers -check nouninit -check stack -check noshape -ftrapuv -dryrun -c /Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/memory/ed_state_vars.F90 -o /Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug/ED2.build/Objects-normal/x86_64/ed_state_vars.o

/opt/intel/compilers_and_libraries_2019.3.199/mac/bin/intel64/fpp  \
    -D__INTEL_COMPILER=1900 \
    -D__INTEL_COMPILER_UPDATE=0 \
    -D__x86_64 \
    -D__x86_64__ \
    -D__amd64 \
    -D__amd64__ \
    -D__INTEL_COMPILER_BUILD_DATE=20190206 \
    -D__PIC__ \
    -D__APPLE__ \
    -D__MACH__ \
    -D_OPENMP=201611 \
    -D__pentium4 \
    -D__pentium4__ \
    -D__tune_pentium4__ \
    -D__SSE2__ \
    -D__SSE2_MATH__ \
    -D__SSE3__ \
    -D__SSSE3__ \
    -D__SSE__ \
    -D__SSE_MATH__ \
    -D__MMX__ \
    -Difdef \
    -I. \
    -I/Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Products/Debug/include \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/mkl/include \
    -I/usr/local/hdf-1-10.5/include \
    -I/Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/include \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/mkl/include/intel64/lp64 \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/mkl/include \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/compiler/include/intel64 \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/compiler/include/icc \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/compiler/include \
    -I/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/10.0.1/include \
    -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include/ \
    -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include \
    -4Ycpp \
    -4Ncvf \
    -f_com=yes \
    -MX \
    /Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/memory/ed_state_vars.F90 \
    /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199kM95n8.i90

/opt/intel/compilers_and_libraries_2019.3.199/mac/bin/intel64/fortcom  \
    -D__INTEL_COMPILER=1900 \
    -D__INTEL_COMPILER_UPDATE=0 \
    -D__x86_64 \
    -D__x86_64__ \
    -D__amd64 \
    -D__amd64__ \
    -D__INTEL_COMPILER_BUILD_DATE=20190206 \
    -D__PIC__ \
    -D__APPLE__ \
    -D__MACH__ \
    -D_OPENMP=201611 \
    -D__pentium4 \
    -D__pentium4__ \
    -D__tune_pentium4__ \
    -D__SSE2__ \
    -D__SSE2_MATH__ \
    -D__SSE3__ \
    -D__SSSE3__ \
    -D__SSE__ \
    -D__SSE_MATH__ \
    -D__MMX__ \
    -mGLOB_pack_sort_init_list \
    -I/Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/memory \
    -I. \
    -I/Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Products/Debug/include \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/mkl/include \
    -I/usr/local/hdf-1-10.5/include \
    -I/Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/include \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/mkl/include/intel64/lp64 \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/mkl/include \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/compiler/include/intel64 \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/compiler/include/icc \
    -I/opt/intel/compilers_and_libraries_2019.3.199/mac/compiler/include \
    -I/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/10.0.1/include \
    -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include/ \
    -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/include \
    "-align nosequence" \
    -altparam \
    "-assume nobuffered_io" \
    "-assume cc_omp" \
    "-assume recursion" \
    "-assume byterecl" \
    "-assume fpe_summary" \
    "-assume minus0" \
    "-assume noold_ldout_format" \
    "-assume noold_maxminloc" \
    "-assume noold_unit_star" \
    "-assume noold_xor" \
    "-assume protect_parens" \
    "-assume realloc_lhs" \
    "-assume std_intent_in" \
    "-assume std_minus0_rounding" \
    "-assume std_mod_proc_name" \
    "-assume std_value" \
    "-assume nobscc" \
    "-assume nodummy_aliases" \
    "-assume protect_constants" \
    "-assume nobyterecl" \
    "-assume nominus0" \
    "-assume nounderscore" \
    -automatic \
    "-check nobounds" \
    "-check nooutput_conversion" \
    "-check noformat" \
    "-check noarg_temp_created" \
    "-check nopointers" \
    "-check nouninitialized" \
    "-check stack" \
    "-check noshape" \
    -fpe0 \
    -noftz \
    "-fpscomp logicals" \
    "-fp_model no_except" \
    "-fp_modspec fp_speculation_OFF" \
    "-fp_modbits no_ftz" \
    "-init nosnan" \
    "-init nozero" \
    "-init snan" \
    "-module /Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug" \
    -omp \
    -omp_simd \
    -parallel \
    -O0 \
    -nopad_source \
    -g2 \
    "-reentrancy threaded" \
    "-stand f08" \
    -traceback \
    "-warn declarations" \
    "-warn unused" \
    "-warn noignore_loc" \
    "-warn notruncated_source" \
    "-warn noalignments" \
    "-warn uncalled" \
    "-warn usage" \
    "-warn nointerfaces" \
    "-warn noshape" \
    -simd \
    -mGLOB_em64t=TRUE \
    -mP1OPT_version=19.0-intel64 \
    -mGLOB_diag_file=/Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug/ED2.build/Objects-normal/x86_64/ed_state_vars.diag \
    -mGLOB_diag_use_message_catalog=FALSE \
    -mGLOB_long_size_64 \
    -mGLOB_routine_pointer_size_64 \
    -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 \
    -mP2OPT_static_promotion \
    -mP1OPT_print_version=FALSE \
    -mCG_use_gas_got_workaround=F \
    -mP2OPT_align_option_used=TRUE \
    -mGLOB_gcc_version=490 \
    "-mGLOB_options_string=-I/Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Products/Debug/include -I/opt/intel/compilers_and_libraries_2019.3.199/mac/mkl/include -I/usr/local/hdf-1-10.5/include -I/Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/include -arch x86_64 -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -mmacosx-version-min=10.14 -g -O0 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -parallel -assume nobuffered_io -mkl=parallel -fpp -Difdef -noD -assume cc-omp -recursive -reentrancy threaded -nopad_source -altparam -nod-lines -qopenmp -standard-semantics -novms -nof77rtl -nointconstant -assume nobscc -stand f08 -warn nostderrors -warn declarations -warn unused -warn noignore-loc -warn notruncated-source -warn noalignments -warn uncalled -warn usage -warn nointerfaces -warn noshape -init=nosnan -init=nozero -align nosequence -assume nodummy_aliases -assume protect-constants -assume nobyterecl -fno-zero-initialized-in-bss -fp-model no-except -nofltconsistency -no-fp-port -no-ftz -nofpconstant -assume nominus0 -no-complex-limited-range -fp-stack-check -assume nounderscore -nogen-interfaces -module /Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug -traceback -check nobounds -check nooutput-conversion -check noformat -check noarg-temp-created -check nopointers -check nouninit -check stack -check noshape -ftrapuv -dryrun -c -o /Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug/ED2.build/Objects-normal/x86_64/ed_state_vars.o" \
    -mGLOB_position_independent_code \
    -mGLOB_preemption_model=1 \
    -mGLOB_no_compact_unwind=TRUE \
    -mGLOB_cxx_limited_range=FALSE \
    -mGLOB_traceback \
    -mCG_extend_parms=FALSE \
    -mGLOB_compiler_bin_directory=/opt/intel/compilers_and_libraries_2019.3.199/mac/bin/intel64 \
    -mP3OPT_emit_line_numbers \
    -mP2OPT_suppress_unreferenced_locals=FALSE \
    -mGLOB_debug_target=GLOB_DEBUG_TARGET_ALL \
    -mDEBUG_info_level=2 \
    -mP1OPT_vft_trigger_debug_types=FALSE \
    -mIPOPT_ninl_debug_info=TRUE \
    -mDEBUG_emit_dwarf_inline_info=TRUE \
    -mGLOB_debug_format=GLOB_DEBUG_FORMAT_DWARF20 \
    -mP3OPT_dwarf_format=P3OPT_DWARF_FORMAT_OBJ_ONLY \
    -mGLOB_as_output_backup_file_name=/var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_19996YWl4as_.s \
    -mP3OPT_debug_gz=10 \
    -mGLOB_uarch_tuning=0x0 \
    -mGLOB_product_id_code=0x22006d91 \
    -mGLOB_maintain_errno \
    -mGLOB_noinline_intrinsics \
    -mGLOB_use_base_pointer=1 \
    -mCG_fpstkchk=TRUE \
    -mCG_bnl_movbe=T \
    -mGLOB_fp_speculation=GLOB_FP_SPECULATION_OFF \
    -mGLOB_extended_instructions=0x80 \
    -mP3OPT_use_mspp_call_convention \
    -mP2OPT_subs_out_of_bound=FALSE \
    -mP2OPT_disam_type_based_disam=2 \
    -mGLOB_ansi_alias \
    -mGLOB_no_zero_initialized_in_bss \
    -mIPOPT_ninl_limit=0 \
    -mIPOPT_ninl_user_level=0 \
    -mPGOPTI_value_profile_use=T \
    -mP2OPT_align_array_to_cache_line=FALSE \
    -mPAROPT_openmp=TRUE \
    -mP2OPT_hpo_omp_simd_only=FALSE \
    -mCG_stack_security_check=0x9 \
    -mP2OPT_gen_linux_const_pooling=FALSE \
    -mGLOB_opt_level=0 \
    -mIPOPT_args_in_regs=0 \
    -mP2OPT_disam_assume_nonstd_intent_in=FALSE \
    -mGLOB_imf_mapping_library=/opt/intel/compilers_and_libraries_2019.3.199/mac/bin/intel64/libiml_attr.dylib \
    -mP2OPT_hlo_embed_loopinfo \
    -mPGOPTI_gen_threadsafe_level=0 \
    -mIPOPT_obj_output_file_name=/Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug/ED2.build/Objects-normal/x86_64/ed_state_vars.o \
    -mIPOPT_whole_archive_fixup_file_name=/var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199warchKiPbCw \
    -mGLOB_linker=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld \
    -mGLOB_driver_tempfile_name=/var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199tempfileXREfDv \
    -mGLOB_os_target=GLOB_OS_TARGET_MACH \
    -mGLOB_async_unwind_tables=TRUE \
    -mGLOB_obj_output_file=/Users/manfredo/Library/Developer/Xcode/DerivedData/ED2-bzpotpyhearnjhdlpmzxdtkugvki/Build/Intermediates.noindex/ED2.build/Debug/ED2.build/Objects-normal/x86_64/ed_state_vars.o \
    -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN \
    -mP1OPT_source_file_name=/Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/memory/ed_state_vars.F90 \
    -mP1OPT_full_source_file_name=/Users/manfredo/Documents/Eclipse_workspace/ED2/ED/src/memory/ed_state_vars.F90 \
    -mP2OPT_symtab_type_copy=true \
    /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199kM95n8.i90

rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199dashvE6xeyP
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199dummyUlNCdy.c
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199xcrunEnVgc9
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199searchdirs8ZS3Q3
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199clangdashvNexo7g
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199kM95n8.i90
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199osN5bGsO
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199tosgqTU07
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199argy9wK7o
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199os8Wqp8f
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199tosQpVuoi
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199gdb_vP9VFkW
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_19996YWl4as_.s
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199tempfileXREfDv
rm /var/folders/yl/9ln6pnbs5k5_wrwqvz06t0100000gn/T/ifort-19_0_3_199argn5dvPZ

 

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jimdempseyatthecove
Honored Contributor III
‎04-30-2019 08:46 AM
726 Views

Ronald,

Manfredo stated: The file at which the compilation stops is very large (27000 lines).

It is not completely clear as to if he meant at the command line (in the script/make file) or inside the compiler once starting to compile.

The only odd think I see in the -dryrun is: line 159

      "-mGLOB_options_string=-I/Users..."

I am not sure if ifort will treat this equivalent to

      -mGLOB_options_string="-I/Users..."

Jim Dempsey

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Manfredo_d_
Beginner
‎04-30-2019 09:44 AM
726 Views

The file ed_state_vars.F90 is the file which fails to compile. That file is ~27000 lines.

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