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corrputed double link list ...

AronRoland
Beginner
84 Views

Hi All,

 

the application is running on intel-mpi using a lot of debug flags but still I got no traceback. I got the following below. Now the debug flags I usually utilize are the following:

-traceback -g -check all -warn interfaces,nouncalled -gen-interface -convert big_endian -check noarg_temp_created -assume byterecl -convert big_endian

The final exit code form the intel mpi is:

 

===================================================================================
=   BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES
=   PID 11115 RUNNING AT r1i3n6.ib0.ice.ifremer.fr
=   EXIT CODE: 6
=   CLEANING UP REMAINING PROCESSES
=   YOU CAN IGNORE THE BELOW CLEANUP MESSAGES
===================================================================================

I would really appreciate some hints on that issue and thank everybody in advance.

 

====== Backtrace: =========
/lib64/libc.so.6(+0x7277f)[0x2aaaae0a377f]
/lib64/libc.so.6(+0x78026)[0x2aaaae0a9026]
/lib64/libc.so.6(+0x78fcd)[0x2aaaae0a9fcd]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel(for_dealloc_allocatable+0x19d)[0x13c84dd]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0x1229d8d]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0x124c9d0]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0x115d8bb]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0x11fbd6c]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0x113f5b7]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0xe02cfb]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0xdec70d]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0x60e20c]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0x450f42]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0x40fb4e]
/lib64/libc.so.6(__libc_start_main+0xf5)[0x2aaaae052b25]
/home6/datawork/aroland/PROTOTYPE_COUPLE/EXEC_OASIS1./ww3_shel[0x40fa69]
======= Memory map: ========
00400000-016a2000 r-xp 00000000 00:34 154727494676                       /home6/datahome/aroland/git/ww3.erdc/WW3/build/bin/ww3_shel
018a1000-018a4000 r--p 012a1000 00:34 154727494676                       /home6/datahome/aroland/git/ww3.erdc/WW3/build/bin/ww3_shel
018a4000-018e7000 rw-p 012a4000 00:34 154727494676                       /home6/datahome/aroland/git/ww3.erdc/WW3/build/bin/ww3_shel

018e7000-07039000 rw-p 00000000 00:00 0                                  [heap]
2aaaaaaab000-2aaaaaacc000 r-xp 00000000 00:13 1134647202                 /lib64/ld-2.19.so
2aaaaaacc000-2aaaaaace000 r-xp 00000000 00:00 0                          [vdso]
2aaaaaace000-2aaaaaad0000 rw-p 00000000 00:00 0
2aaaaaad0000-2aaaaaad1000 -w-s 00000000 00:06 33932                      /dev/infiniband/uverbs0
2aaaaaad1000-2aaaaaad2000 -w-s 00001000 00:06 33932                      /dev/infiniband/uverbs0
2aaaaaad2000-2aaaaaad3000 -w-s 00002000 00:06 33932                      /dev/infiniband/uverbs0
2aaaaaad3000-2aaaaaad4000 -w-s 00003000 00:06 33932                      /dev/infiniband/uverbs0
2aaaaaad4000-2aaaaaad5000 -w-s 00004000 00:06 33932                      /dev/infiniband/uverbs0
2aaaaaad5000-2aaaaaad6000 -w-s 00005000 00:06 33932                      /dev/infiniband/uverbs0
2aaaaaad6000-2aaaaaad7000 -w-s 00006000 00:06 33932                      /dev/infiniband/uverbs0
2aaaaaad7000-2aaaaaad8000 -w-s 00007000 00:06 33932                      /dev/infiniband/uverbs0
2aaaaaad8000-2aaaaaad9000 rw-p 00000000 00:00 0
2aaaaaae1000-2aaaaaca2000 rw-p 00000000 00:00 0
2aaaaaccb000-2aaaaaccc000 r--p 00020000 00:13 1134647202                 /lib64/ld-2.19.so
2aaaaaccc000-2aaaaaccd000 rw-p 00021000 00:13 1134647202                 /lib64/ld-2.19.so
2aaaaaccd000-2aaaaacce000 rw-p 00000000 00:00 0
2aaaaacce000-2aaaaad7c000 r-xp 00000000 00:2d 1103155355                 /home/datawork-wave/NETCDF2019/INTEL/lib/libnetcdff.so.7.0.0
2aaaaad7c000-2aaaaaf7b000 ---p 000ae000 00:2d 1103155355                 /home/datawork-wave/NETCDF2019/INTEL/lib/libnetcdff.so.7.0.0
2aaaaaf7b000-2aaaaaf7c000 r--p 000ad000 00:2d 1103155355                 /home/datawork-wave/NETCDF2019/INTEL/lib/libnetcdff.so.7.0.0
2aaaaaf7c000-2aaaaaf7d000 rw-p 000ae000 00:2d 1103155355                 /home/datawork-wave/NETCDF2019/INTEL/lib/libnetcdff.so.7.0.0
2aaaaaf7d000-2aaaab157000 rw-p 00000000 00:00 0
2aaaab157000-2aaaab2fc000 r-xp 00000000 00:2d 1154173885                 /home/datawork-wave/NETCDF2019/INTEL/lib/libnetcdf.so.15.2.1
2aaaab2fc000-2aaaab4fc000 ---p 001a5000 00:2d 1154173885                 /home/datawork-wave/NETCDF2019/INTEL/lib/libnetcdf.so.15.2.1
2aaaab4fc000-2aaaab4fe000 r--p 001a5000 00:2d 1154173885                 /home/datawork-wave/NETCDF2019/INTEL/lib/libnetcdf.so.15.2.1
2aaaab4fe000-2aaaab505000 rw-p 001a7000 00:2d 1154173885                 /home/datawork-wave/NETCDF2019/INTEL/lib/libnetcdf.so.15.2.1
2aaaab505000-2aaaab508000 rw-p 00000000 00:00 0
2aaaab508000-2aaaab608000 r-xp 00000000 00:13 1134647297                 /lib64/libm-2.19.so
2aaaab608000-2aaaab807000 ---p 00100000 00:13 1134647297                 /lib64/libm-2.19.so

2aaaab807000-2aaaab808000 r--p 000ff000 00:13 1134647297                 /lib64/libm-2.19.so
2aaaab808000-2aaaab809000 rw-p 00100000 00:13 1134647297                 /lib64/libm-2.19.so
2aaaab809000-2aaaab82e000 r-xp 00000000 00:2d 1162693530                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5hl_fortran.so.100.0.4
2aaaab82e000-2aaaaba2d000 ---p 00025000 00:2d 1162693530                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5hl_fortran.so.100.0.4
2aaaaba2d000-2aaaaba2e000 r--p 00024000 00:2d 1162693530                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5hl_fortran.so.100.0.4
2aaaaba2e000-2aaaaba2f000 rw-p 00025000 00:2d 1162693530                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5hl_fortran.so.100.0.4
2aaaaba2f000-2aaaaba56000 r-xp 00000000 00:2d 1162693505                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5_hl.so.100.1.2
2aaaaba56000-2aaaabc55000 ---p 00027000 00:2d 1162693505                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5_hl.so.100.1.2
2aaaabc55000-2aaaabc56000 r--p 00026000 00:2d 1162693505                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5_hl.so.100.1.2
2aaaabc56000-2aaaabc57000 rw-p 00027000 00:2d 1162693505                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5_hl.so.100.1.2
2aaaabc57000-2aaaabc58000 rw-p 00000000 00:00 0
2aaaabc58000-2aaaabcb0000 r-xp 00000000 00:2d 1162693488                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5_fortran.so.102.0.0
2aaaabcb0000-2aaaabeb0000 ---p 00058000 00:2d 1162693488                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5_fortran.so.102.0.0
2aaaabeb0000-2aaaabeb1000 r--p 00058000 00:2d 1162693488                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5_fortran.so.102.0.0
2aaaabeb1000-2aaaabeb3000 rw-p 00059000 00:2d 1162693488                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5_fortran.so.102.0.0
2aaaabeb3000-2aaaabeb5000 rw-p 00000000 00:00 0
2aaaabeb5000-2aaaac381000 r-xp 00000000 00:2d 1154328756                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5.so.103.1.0
2aaaac381000-2aaaac581000 ---p 004cc000 00:2d 1154328756                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5.so.103.1.0
2aaaac581000-2aaaac58b000 r--p 004cc000 00:2d 1154328756                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5.so.103.1.0
2aaaac58b000-2aaaac595000 rw-p 004d6000 00:2d 1154328756                 /home/datawork-wave/NETCDF2019/INTEL/lib/libhdf5.so.103.1.0
2aaaac595000-2aaaac598000 rw-p 00000000 00:00 0
2aaaac598000-2aaaac59b000 r-xp 00000000 00:13 1134647275                 /lib64/libdl-2.19.so
2aaaac59b000-2aaaac79a000 ---p 00003000 00:13 1134647275                 /lib64/libdl-2.19.so
2aaaac79a000-2aaaac79b000 r--p 00002000 00:13 1134647275                 /lib64/libdl-2.19.so
2aaaac79b000-2aaaac79c000 rw-p 00003000 00:13 1134647275                 /lib64/libdl-2.19.so
2aaaac79c000-2aaaac7b1000 r-xp 00000000 00:13 1134647393                 /lib64/libz.so.1.2.8
2aaaac7b1000-2aaaac9b0000 ---p 00015000 00:13 1134647393                 /lib64/libz.so.1.2.8
2aaaac9b0000-2aaaac9b1000 r--p 00014000 00:13 1134647393                 /lib64/libz.so.1.2.8
2aaaac9b1000-2aaaac9b2000 rw-p 00015000 00:13 1134647393                 /lib64/libz.so.1.2.8
2aaaac9b2000-2aaaac9dc000 r-xp 00000000 00:2d 1136948117                 /home/datawork-wave/NETCDF2019/INTEL/lib/libudunits2.so.0.1.0
2aaaac9dc000-2aaaacbdc000 ---p 0002a000 00:2d 1136948117                 /home/datawork-wave/NETCDF2019/INTEL/lib/libudunits2.so.0.1.0
2aaaacbdc000-2aaaacbdd000 r--p 0002a000 00:2d 1136948117                 /home/datawork-wave/NETCDF2019/INTEL/lib/libudunits2.so.0.1.0
2aaaacbdd000-2aaaacbde000 rw-p 0002b000 00:2d 1136948117                 /home/datawork-wave/NETCDF2019/INTEL/lib/libudunits2.so.0.1.0
2aaaacbde000-2aaaacd5c000 r-xp 00000000 00:25 116597676062               /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/mpi/intel64/lib/libmpifort.so.12.0
2aaaacd5c000-2aaaacf5c000 ---p 0017e000 00:25 116597676062               /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/mpi/intel64/lib/libmpifort.so.12.0
2aaaacf5c000-2aaaacf63000 rw-p 0017e000 00:25 116597676062               /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/mpi/intel64/lib/libmpifort.so.12.0
2aaaacf63000-2aaaacf87000 rw-p 00000000 00:00 0
2aaaacf87000-2aaaad63b000 r-xp 00000000 00:25 125350913072               /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/mpi/intel64/lib/release_mt/libmpi.so.12.0
2aaaad63b000-2aaaad83a000 ---p 006b4000 00:25 125350913072               /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/mpi/intel64/lib/release_mt/libmpi.so.12.0
2aaaad83a000-2aaaad875000 rw-p 006b3000 00:25 125350913072               /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/mpi/intel64/lib/release_mt/libmpi.so.12.0
2aaaad875000-2aaaadc0c000 rw-p 00000000 00:00 0
2aaaadc0c000-2aaaadc13000 r-xp 00000000 00:13 1134647370                 /lib64/librt-2.19.so
2aaaadc13000-2aaaade12000 ---p 00007000 00:13 1134647370                 /lib64/librt-2.19.so
2aaaade12000-2aaaade13000 r--p 00006000 00:13 1134647370                 /lib64/librt-2.19.so
2aaaade13000-2aaaade14000 rw-p 00007000 00:13 1134647370                 /lib64/librt-2.19.so
2aaaade14000-2aaaade2c000 r-xp 00000000 00:13 1134647366                 /lib64/libpthread-2.19.so
2aaaade2c000-2aaaae02b000 ---p 00018000 00:13 1134647366                 /lib64/libpthread-2.19.so
2aaaae02b000-2aaaae02c000 r--p 00017000 00:13 1134647366                 /lib64/libpthread-2.19.so
2aaaae02c000-2aaaae02d000 rw-p 00018000 00:13 1134647366                 /lib64/libpthread-2.19.so
2aaaae02d000-2aaaae031000 rw-p 00000000 00:00 0
2aaaae031000-2aaaae1cf000 r-xp 00000000 00:13 1134647219                 /lib64/libc-2.19.so
2aaaae1cf000-2aaaae3cf000 ---p 0019e000 00:13 1134647219                 /lib64/libc-2.19.so
2aaaae3cf000-2aaaae3d3000 r--p 0019e000 00:13 1134647219                 /lib64/libc-2.19.so
2aaaae3d3000-2aaaae3d5000 rw-p 001a2000 00:13 1134647219                 /lib64/libc-2.19.so
2aaaae3d5000-2aaaae3d9000 rw-p 00000000 00:00 0
2aaaae3d9000-2aaaae3ef000 r-xp 00000000 00:25 30532114461                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/vtune_amplifier_2018.1.0.535340/lib64/libgcc_s.so.1
2aaaae3ef000-2aaaae5ef000 ---p 00016000 00:25 30532114461                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/vtune_amplifier_2018.1.0.535340/lib64/libgcc_s.so.1
2aaaae5ef000-2aaaae5f0000 rw-p 00016000 00:25 30532114461                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/vtune_amplifier_2018.1.0.535340/lib64/libgcc_s.so.1
2aaaae5f0000-2aaaae68f000 r-xp 00000000 00:2d 1078570120                 /home/datawork-wave/NETCDF2019/INTEL/lib/libcurl.so.4.6.0
2aaaae68f000-2aaaae88f000 ---p 0009f000 00:2d 1078570120                 /home/datawork-wave/NETCDF2019/INTEL/lib/libcurl.so.4.6.0
2aaaae88f000-2aaaae891000 r--p 0009f000 00:2d 1078570120                 /home/datawork-wave/NETCDF2019/INTEL/lib/libcurl.so.4.6.0
2aaaae891000-2aaaae892000 rw-p 000a1000 00:2d 1078570120                 /home/datawork-wave/NETCDF2019/INTEL/lib/libcurl.so.4.6.0
2aaaae892000-2aaaae8c4000 r-xp 00000000 00:2d 1136947934                 /home/datawork-wave/NETCDF2019/INTEL/lib/libexpat.so.1.6.7
2aaaae8c4000-2aaaaeac4000 ---p 00032000 00:2d 1136947934                 /home/datawork-wave/NETCDF2019/INTEL/lib/libexpat.so.1.6.7
2aaaaeac4000-2aaaaeac6000 r--p 00032000 00:2d 1136947934                 /home/datawork-wave/NETCDF2019/INTEL/lib/libexpat.so.1.6.7
2aaaaeac6000-2aaaaeac7000 rw-p 00034000 00:2d 1136947934                 /home/datawork-wave/NETCDF2019/INTEL/lib/libexpat.so.1.6.7
2aaaaeac7000-2aaaaeaed000 r-xp 00000000 00:25 73227502649                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libifport.so.5
2aaaaeaed000-2aaaaeced000 ---p 00026000 00:25 73227502649                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libifport.so.5
2aaaaeced000-2aaaaecee000 r--p 00026000 00:25 73227502649                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libifport.so.5
2aaaaecee000-2aaaaecf0000 rw-p 00027000 00:25 73227502649                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libifport.so.5
2aaaaecf0000-2aaaaecf6000 rw-p 00000000 00:00 0
2aaaaecf6000-2aaaaee32000 r-xp 00000000 00:25 73225188642                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libifcoremt.so.5
2aaaaee32000-2aaaaf032000 ---p 0013c000 00:25 73225188642                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libifcoremt.so.5
2aaaaf032000-2aaaaf035000 r--p 0013c000 00:25 73225188642                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libifcoremt.so.5
2aaaaf035000-2aaaaf038000 rw-p 0013f000 00:25 73225188642                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libifcoremt.so.5
2aaaaf038000-2aaaaf08a000 rw-p 00000000 00:00 0
2aaaaf08a000-2aaaaf3bc000 r-xp 00000000 00:25 73209669656                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libimf.so
2aaaaf3bc000-2aaaaf5bc000 ---p 00332000 00:25 73209669656                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libimf.so
2aaaaf5bc000-2aaaaf5c3000 r--p 00332000 00:25 73209669656                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libimf.so
2aaaaf5c3000-2aaaaf618000 rw-p 00339000 00:25 73209669656                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libimf.so
2aaaaf618000-2aaab0a75000 r-xp 00000000 00:25 73210089485                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libsvml.so
2aaab0a75000-2aaab0c74000 ---p 0145d000 00:25 73210089485                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libsvml.so
2aaab0c74000-2aaab0cc4000 r--p 0145c000 00:25 73210089485                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libsvml.so
2aaab0cc4000-2aaab0ccb000 rw-p 014ac000 00:25 73210089485                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libsvml.so
2aaab0ccb000-2aaab0d36000 r-xp 00000000 00:25 73209669658                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libintlc.so.5
2aaab0d36000-2aaab0f35000 ---p 0006b000 00:25 73209669658                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libintlc.so.5
2aaab0f35000-2aaab0f36000 r--p 0006a000 00:25 73209669658                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libintlc.so.5
2aaab0f36000-2aaab0f37000 rw-p 0006b000 00:25 73209669658                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libintlc.so.5
2aaab0f37000-2aaab0f38000 rw-p 00000000 00:00 0
2aaab0f38000-2aaab1099000 r-xp 00000000 00:25 73209669665                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libirng.so
2aaab1099000-2aaab1298000 ---p 00161000 00:25 73209669665                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libirng.so
2aaab1298000-2aaab1299000 r--p 00160000 00:25 73209669665                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libirng.so
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2aaaacf63000-2aaaacf87000 rw-p 00000000 00:00 0
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2aaaaecee000-2aaaaecf0000 rw-p 00027000 00:25 73227502649                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libifport.so.5
2aaaaecf0000-2aaaaecf6000 rw-p 00000000 00:00 0
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2aaaaf038000-2aaaaf08a000 rw-p 00000000 00:00 0
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2aaaaf618000-2aaab0a75000 r-xp 00000000 00:25 73210089485                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libsvml.so
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2aaab0f37000-2aaab0f38000 rw-p 00000000 00:00 0
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2aaab1299000-2aaab12ac000 rw-p 00161000 00:25 73209669665                /appli/intel/parallel_studio/parallel_studio_xe_2018_update1/compilers_and_libraries_2018.1.163/linux/compiler/lib/intel64_lin/libirng.so
2aaab12ac000-2aaab133e000 r-xp 00000000 00:2d 1162317248                 /home/datawork-wave/NETCDF2019/INTEL/lib/libssl.so.1.1
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2aaab154a000-2aaab183c000 r-xp 00000000 00:2d 1162317236                 /home/datawork-wave/NETCDF2019/INTEL/lib/libcrypto.so.1.1
2aaab183c000-2aaab1a3b000 ---p 002f2000 00:2d 1162317236                 /home/datawork-wave/NETCDF2019/INTEL/lib/libcrypto.so.1.1
2aaab1a3b000-2aaab1a65000 r--p 002f1000 00:2d 1162317236                 /home/datawork-wave/NETCDF2019/INTEL/lib/libcrypto.so.1.1
2aaab1a65000-2aaab1a67000 rw-p 0031b000 00:2d 1162317236                 /home/datawork-wave/NETCDF2019/INTEL/lib/libcrypto.so.1.1
2aaab1a67000-2aaab1a6c000 rw-p 00000000 00:00 0
2aaab1a6c000-2aaab1a76000 r-xp 00000000 00:13 22885795                   /usr/lib64/libnuma.so.1
2aaab1a76000-2aaab1c76000 ---p 0000a000 00:13 22885795                   /usr/lib64/libnuma.so.1
2aaab1c76000-2aaab1c77000 r--p 0000a000 00:13 22885795                   /usr/lib64/libnuma.so.1
2aaab1c77000-2aaab1c78000 rw-p 0000b000 00:13 22885795                   /usr/lib64/libnuma.so.1
2aaab1c78000-2aaac2bc7000 rw-s 00000000 00:11 485164184                  /dev/shm/Intel_MPI_WHOg41 (deleted)
2aaac2bc7000-2aaac2bd1000 r-xp 00000000 00:13 22884908                   /usr/lib64/libdat2.so.2.0.0
2aaac2bd1000-2aaac2dd0000 ---p 0000a000 00:13 22884908                   /usr/lib64/libdat2.so.2.0.0
2aaac2dd0000-2aaac2dd1000 r--p 00009000 00:13 22884908                   /usr/lib64/libdat2.so.2.0.0
2aaac2dd1000-2aaac2dd2000 rw-p 0000a000 00:13 22884908                   /usr/lib64/libdat2.so.2.0.0


 

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jimdempseyatthecove
Black Belt
76 Views

I suggest you go "old school" and add some diagnostic using fpp and inserting

 

    print *,__FILE__, __LINE__

 

In parts of the program (add and remove as you see fit).

 

Use the printouts as a fencing means the narrow the search for where the problematic area resides. Then examine the code for something suspicious.

Your post title "corrputed double link list" indicates you are dealing with double linked lists. You may have a design issue. For example, you use pointers to allocatables, that for some reason get reallocated or deallocated.

Note, due to default reallocate_lhs == .true. addresses might not be as "permanent" as assumed. 

 

Jim Dempsey

 

 

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