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After removing intel toolkit, g++ looking for intel math library and complain error

BenTanison12
Beginner
236 Views

This is centos system. I have installed intel HPC toolkit(toolkit before intel OneAPI, including intel C++/c/fortan/MKL...). Then after I remove the intel toolkit, my g++ didn't work (so does my gcc, same error). It seems the g++ is looking for intel math library. Since I removed the intel toolkit, it can not find the intel math library and complain error.

How can I tell g++ do not to find intel math library? And how can I know what library g++ are looking for?

Thank you for your help!

The c++ example

#include<iostream> #include<cmath>
int main(){
int a = 1<<31;
std::cout<<"a is "<< a <<std::endl;
int b = std::abs(a);
std::cout<<"b is "<< b <<std::endl;
return 0;
}


the command I used to compile the c++ example

g++ a.cpp
the error it complain

/usr/local/gcc/10.1.0/libexec/gcc/x86_64-pc-linux-gnu/10.1.0/cc1plus: error while loading shared libraries: libsvml.so: cannot open shared object file: No such file or directory
LDD result: for my gcc

(base) [Js@XiaoXin13pro ~]$ ldd /usr/local/gcc/10.1.0/libexec/gcc/x86_64-pc-linux-gnu/10.1.0/cc1plus
linux-vdso.so.1 => (0x00007fffffad5000)
libisl.so.15 => /usr/local/lib/libisl.so.15 (0x00007f111d980000)
libmpc.so.3 => /usr/local/lib/libmpc.so.3 (0x00007f111d760000)
libmpfr.so.4 => /usr/local/lib/libmpfr.so.4 (0x00007f111d4f0000)
libgmp.so.10 => /usr/local/lib/libgmp.so.10 (0x00007f111d260000)
libdl.so.2 => /lib64/libdl.so.2 (0x00007f111d040000)
libm.so.6 => /lib64/libm.so.6 (0x00007f111cd30000)
libc.so.6 => /lib64/libc.so.6 (0x00007f111c960000)
/lib64/ld-linux-x86-64.so.2 (0x00007f111de00000)
libimf.so => /lib64/libimf.so (0x00007f111c490000)
libsvml.so => not found
libirng.so => not found
libgcc_s.so.1 => /usr/local/gcc/10.1.0/lib64/libgcc_s.so.1 (0x00007f111c260000)
libintlc.so.5 => not found
libsvml.so => not found
libirng.so => not found
libintlc.so.5 => not found
libsvml.so => not found
libirng.so => not found
libintlc.so.5 => not found
libsvml.so => not found
libirng.so => not found
libintlc.so.5 => not found
libintlc.so.5 => not found
LDD result: for system gcc

(base) [Js@XiaoXin13pro ~]$ ldd /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/cc1plus
linux-vdso.so.1 => (0x00007fffea241000)
libdl.so.2 => /lib64/libdl.so.2 (0x00007f225a4e0000)
libmpc.so.3 => /usr/local/lib/libmpc.so.3 (0x00007f225a2c0000)
libmpfr.so.4 => /usr/local/lib/libmpfr.so.4 (0x00007f225a050000)
libgmp.so.10 => /usr/local/lib/libgmp.so.10 (0x00007f2259dc0000)
libz.so.1 => /lib64/libz.so.1 (0x00007f2259b90000)
libm.so.6 => /lib64/libm.so.6 (0x00007f2259880000)
libc.so.6 => /lib64/libc.so.6 (0x00007f22594b0000)
/lib64/ld-linux-x86-64.so.2 (0x00007f225a800000)
libimf.so => /lib64/libimf.so (0x00007f2258fe0000)
libsvml.so => not found
libirng.so => not found
libgcc_s.so.1 => /usr/local/gcc/10.1.0/lib64/libgcc_s.so.1 (0x00007f2258db0000)
libintlc.so.5 => not found
libsvml.so => not found
libirng.so => not found
libintlc.so.5 => not found
libsvml.so => not found
libirng.so => not found
libintlc.so.5 => not found
libintlc.so.5 => not found


update gcc using scl:

sudo yum install centos-release-scl
sudo yum install devtoolset-8-gcc*
scl enable devtoolset-8 bash

check gcc

(base) [Js@XiaoXin13pro ~]$ which gcc
/opt/rh/devtoolset-8/root/usr/bin/gcc
(base) [Js@XiaoXin13pro ~]$ gcc --version
gcc (GCC) 8.3.1 20190311 (Red Hat 8.3.1-3)
Copyright (C) 2018 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.


and still complain

(base) [Js@XiaoXin13pro ~]$ g++ a.cpp
/opt/rh/devtoolset-8/root/usr/libexec/gcc/x86_64-redhat-linux/8/cc1plus: error while loading shared libraries: libsvml.so: cannot open shared object file: No such file or directory


and ldd result

(base) [Js@XiaoXin13pro ~]$ ldd /opt/rh/devtoolset-8/root/usr/libexec/gcc/x86_64-redhat-linux/8/cc1plus
linux-vdso.so.1 => (0x00007ffff5a56000)
libdl.so.2 => /lib64/libdl.so.2 (0x00007fe19add0000)
libmpc.so.3 => /usr/local/lib/libmpc.so.3 (0x00007fe19abb0000)
libmpfr.so.4 => /usr/local/lib/libmpfr.so.4 (0x00007fe19a940000)
libgmp.so.10 => /usr/local/lib/libgmp.so.10 (0x00007fe19a6b0000)
libz.so.1 => /lib64/libz.so.1 (0x00007fe19a480000)
libm.so.6 => /lib64/libm.so.6 (0x00007fe19a170000)
libc.so.6 => /lib64/libc.so.6 (0x00007fe199da0000)
/lib64/ld-linux-x86-64.so.2 (0x00007fe19b000000)
libimf.so => /lib64/libimf.so (0x00007fe1998d0000)
libsvml.so => not found
libirng.so => not found
libgcc_s.so.1 => /usr/local/gcc/10.1.0/lib64/libgcc_s.so.1 (0x00007fe1996a0000)
libintlc.so.5 => not found
libsvml.so => not found
libirng.so => not found
libintlc.so.5 => not found
libsvml.so => not found
libirng.so => not found
libintlc.so.5 => not found
libintlc.so.5 => not found

 

0 Kudos
2 Replies
ArpanB_Intel
Moderator
225 Views

Hi Ben, Intel® oneAPI HPC Toolkit has internal dependencies on Intel® oneAPI Base Toolkit. Thus, we suggest our users to install the Intel® oneAPI Base Toolkit first followed by Intel® oneAPI HPC Toolkit. Intel® oneAPI HPC Toolkit requires the Base Toolkit for optimum performance.


Thus, we suggest you to re-install the Intel® oneAPI Base Toolkit.


ArpanB_Intel
Moderator
209 Views

Ben, unfortunately we were unable to hear back from you.


If you have any further queries, please post a new question as this thread will no longer be monitored by Intel®.


Reply