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When trying to update my intel-oneapi packages:
Error: Transaction test error:
file /opt/intel/oneapi/lib/intel64/bin/tune from install of intel-oneapi-runtime-mpi-2021.10.0-4
9371.x86_64 conflicts with file from package intel-oneapi-runtime-mpi-2021.9.0-43482.x86_64
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So, we are going from a directory:
# ls -l /opt/intel/oneapi/lib/intel64/bin/tune
total 12608
-rwxr-xr-x. 1 root root 12906728 Mar 7 15:48 mpitune*
To a symbolic link:
# ls -l /opt/intel/oneapi/lib/intel64/bin/tune
lrwxrwxrwx. 1 root root 9 Jun 30 04:42 /opt/intel/oneapi/lib/intel64/bin/tune -> tune_fast/
RPM cannot support this. See https://docs.fedoraproject.org/en-US/packaging-guidelines/Directory_Replacement/ for more information and a workaround.
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Hi Orion, please share the below information with us:
- Linux distribution on which you are installing the software
- Other versions of Intel® Parallel Studio XE or Intel® oneAPI already installed on your system
- Is the installer an online or an offline package?
- Installation Log files
The default path for a log file for a oneAPI installation is: opt/intel/oneapi/logs
The default path for a log file for a Parallel Studio XE installation is: /tmp/intel.pset.<user>.<machine>.<timestamp>.log
We would like to know.
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This is on AlmaLinux 8. We are simply doing yum installs of the desired packages from the oneAPI yum repo https://yum.repos.intel.com
/oneapi.
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Orion, thank you for the information. Do you have older runtime installations in your current installation directory?
We would like to know.
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The issue comes when you try to upgrade from intel-oneapi-runtime-mpi-2021.9.0-43482.x86_64 to intel-oneapi-runtime-mpi-2021.10.0-49371.x86_64. So to reproduce:
yum install intel-oneapi-runtime-mpi-2021.9.0-43482.x86_64
yum upgrade intel-oneapi-runtime-mpi
Last metadata expiration check: 2:26:38 ago on Thu 20 Jul 2023 10:59:46 AM MDT.
Dependencies resolved.
==================================================================================================
Package Architecture Version Repository Size
==================================================================================================
Upgrading:
intel-oneapi-runtime-mpi x86_64 2021.10.0-49371 oneAPI 22 M
Transaction Summary
==================================================================================================
Upgrade 1 Package
Total download size: 22 M
Is this ok [y/N]: y
Downloading Packages:
intel-oneapi-runtime-mpi-2021.10.0-49371.x86_64.rpm 6.1 MB/s | 22 MB 00:03
--------------------------------------------------------------------------------------------------
Total 6.0 MB/s | 22 MB 00:03
Running transaction check
Transaction check succeeded.
Running transaction test
The downloaded packages were saved in cache until the next successful transaction.
You can remove cached packages by executing 'yum clean packages'.
Error: Transaction test error:
file /opt/intel/oneapi/lib/intel64/bin/tune from install of intel-oneapi-runtime-mpi-2021.10.0-4
9371.x86_64 conflicts with file from package intel-oneapi-runtime-mpi-2021.9.0-43482.x86_64
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Orion, could you try installing the new version of packages in a different directory or uninstall the older packages and then install the new one?
We would like to know.
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That works fine, it's only the upgrade path that fails. I suggest reading the Fedora Packaging docs page I linked initially - it describes the issue and possible fixes.
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Orion, we have contacted you internally with some information. Please check your inbox for further updates.
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Orion, you can try using the below commands:
$ sudo yum remove rpmforge-release
$ sudo yum update -y
Please note AlmaLinux 8 is not supported by Intel® oneAPI Base Toolkit. To know more, please visit: https://www.intel.com/content/www/us/en/developer/articles/system-requirements/intel-oneapi-base-toolkit-system-requirements.html#inpage-nav-2-undefined-undefined
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Orion, unfortunately we were unable to hear back from you.
If you have any further queries, please post a new question as this thread will no longer be monitored by Intel®.
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