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Tuning Genomics Analytics

CyNelson
Employee
343 Views

Is there a tuning guide for genomics analytics?  I'm working with the Broad Institute tech stack and hoping I can speed up my experiments.

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SantoshY_Intel
Moderator
326 Views

Hi,

 

Thank you for posting in Intel Communities.

 

We couldn't find any tuning guide specific to Genomics Analytics. We will get back to you if we find any such tuning guide. For the time being please refer to the below link:

https://www.intel.com/content/www/us/en/products/docs/select-solutions/genomics-analytics-ver3-spotlight.html

 

However, we do have an MPI Tuning guide for MPI-based applications. For more information refer to the below link:

https://www.intel.com/content/www/us/en/develop/documentation/mpi-developer-guide-linux/top/analysis-and-tuning/mpi-tuning.html

 

 

Thanks & Regards,

Santosh

 

 

 

 

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CyNelson
Employee
318 Views

Santosh,

Thanks for your quick reply.  That information is helpful.  I also wanted to share some good news!  I went the Stackoverflow Intel and found the Developers Program portal.  Here's the link to the Genomics Analytics Tuning Guide:

https://www.intel.com/content/www/us/en/developer/articles/guide/tuning-guide-for-genomics-analytics.html

 

Looks like it was published March 9, 2022 so it is quite new.

 

 

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SantoshY_Intel
Moderator
303 Views

Hi,


Glad to know that your issue is resolved. Thanks for sharing the solution with us. If you need any additional information, please post a new question as this thread will no longer be monitored by Intel.


Thanks & Regards,

Santosh


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