- Mark as New
- Bookmark
- Subscribe
- Mute
- Subscribe to RSS Feed
- Permalink
- Report Inappropriate Content
We're having an issue a researcher is having with mpiexec/mpirun running against TRISTAN-MP parallel electromagnetic 3D particle-in-cell code. I have never seen this an error like this: Error: sizex*sizey ne size0size0=4 sizez=1 sizey=120
Modules loaded are:
1) IDL/8.4 10) oneapi/mkl/2024.0 19) oneapi/dal/2024.0.0
2) oneapi/compiler-rt/2024.0.2 11) oneapi/intel_ippcp_intel64/2021.9 20) oneapi/compiler/2024.0.2
3) oneapi/hpctoolkit/compiler-rt/2024.0.2 12) oneapi/intel_ipp_intel64/2021.10 21) oneapi/ccl/2021.11.2
4) oneapi/hpctoolkit/hpctoolkit-2024.0.0 13) oneapi/ifort/2024.0.2 22) oneapi/advisor/2024.0
5) hdf5p-intel/1.14.3 14) oneapi/dpl/2022.3 23) oneapi/2024.0.0/2024.0.0
6) oneapi/tbb/2021.11 15) oneapi/dpct/2024.0.0
7) oneapi/oclfpga/2024.0.0 16) oneapi/dnnl/3.3.0
oneapi/vtune/2024.0 17) oneapi/dev-utilities/2024.0.0
9) oneapi/mpi/2021.11 18) oneapi/debugger/2024.0.0
mpirun -v -np 4 ./tristan-mp2d
[mpiexec@2402-node004] Launch arguments: /usr/bin/srun -N 1 -n 1 --ntasks-per-node 1 --external-launcher --nodelist 2402-node004 --input none /insomnia001/shared/apps/oneapi/mpi/2021.11/bin//hydra_bstrap_proxy --upstream-host 2402-node004 --upstream-port 36537 --pgid 0 --launcher slurm --launcher-number 1 --base-path /insomnia001/shared/apps/oneapi/mpi/2021.11/bin/ --tree-width 16 --tree-level 1 --time-left -1 --launch-type 0 --debug /insomnia001/shared/apps/oneapi/mpi/2021.11/bin//hydra_pmi_proxy --usize -1 --auto-cleanup 1 --abort-signal 9
[proxy:0:0@2402-node004] pmi cmd from fd 9: cmd=init pmi_version=1 pmi_subversion=1
[proxy:0:0@2402-node004] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0
[proxy:0:0@2402-node004] pmi cmd from fd 9: cmd=get_maxes
[proxy:0:0@2402-node004] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=4096
[proxy:0:0@2402-node004] pmi cmd from fd 9: cmd=get_appnum
[proxy:0:0@2402-node004] PMI response: cmd=appnum appnum=0
[proxy:0:0@2402-node004] pmi cmd from fd 9: cmd=get_my_kvsname
[proxy:0:0@2402-node004] PMI response: cmd=my_kvsname kvsname=kvs_1481562_0
[proxy:0:0@2402-node004] pmi cmd from fd 9: cmd=get kvsname=kvs_1481562_0 key=PMI_process_mapping
[proxy:0:0@2402-node004] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,1,4))
[proxy:0:0@2402-node004] pmi cmd from fd 6: cmd=init pmi_version=1 pmi_subversion=1
[proxy:0:0@2402-node004] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0
[proxy:0:0@2402-node004] pmi cmd from fd 6: cmd=get_maxes
[proxy:0:0@2402-node004] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=4096
[proxy:0:0@2402-node004] pmi cmd from fd 6: cmd=get_appnum
[proxy:0:0@2402-node004] PMI response: cmd=appnum appnum=0
[proxy:0:0@2402-node004] pmi cmd from fd 6: cmd=get_my_kvsname
[proxy:0:0@2402-node004] PMI response: cmd=my_kvsname kvsname=kvs_1481562_0
[proxy:0:0@2402-node004] pmi cmd from fd 6: cmd=get kvsname=kvs_1481562_0 key=PMI_process_mapping
[proxy:0:0@2402-node004] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,1,4))
[proxy:0:0@2402-node004] pmi cmd from fd 4: cmd=init pmi_version=1 pmi_subversion=1
[proxy:0:0@2402-node004] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0
[proxy:0:0@2402-node004] pmi cmd from fd 5: cmd=init pmi_version=1 pmi_subversion=1
[proxy:0:0@2402-node004] PMI response: cmd=response_to_init pmi_version=1 pmi_subversion=1 rc=0
[proxy:0:0@2402-node004] pmi cmd from fd 4: cmd=get_maxes
[proxy:0:0@2402-node004] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=4096
[proxy:0:0@2402-node004] pmi cmd from fd 5: cmd=get_maxes
[proxy:0:0@2402-node004] PMI response: cmd=maxes kvsname_max=256 keylen_max=64 vallen_max=4096
[proxy:0:0@2402-node004] pmi cmd from fd 4: cmd=get_appnum
[proxy:0:0@2402-node004] PMI response: cmd=appnum appnum=0
[proxy:0:0@2402-node004] pmi cmd from fd 5: cmd=get_appnum
[proxy:0:0@2402-node004] PMI response: cmd=appnum appnum=0
[proxy:0:0@2402-node004] pmi cmd from fd 4: cmd=get_my_kvsname
[proxy:0:0@2402-node004] PMI response: cmd=my_kvsname kvsname=kvs_1481562_0
[proxy:0:0@2402-node004] pmi cmd from fd 5: cmd=get_my_kvsname
[proxy:0:0@2402-node004] PMI response: cmd=my_kvsname kvsname=kvs_1481562_0
[proxy:0:0@2402-node004] pmi cmd from fd 4: cmd=get kvsname=kvs_1481562_0 key=PMI_process_mapping
[proxy:0:0@2402-node004] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,1,4))
[proxy:0:0@2402-node004] pmi cmd from fd 5: cmd=get kvsname=kvs_1481562_0 key=PMI_process_mapping
[proxy:0:0@2402-node004] PMI response: cmd=get_result rc=0 msg=success value=(vector,(0,1,4))
[proxy:0:0@2402-node004] pmi cmd from fd 9: cmd=barrier_in
[proxy:0:0@2402-node004] pmi cmd from fd 6: cmd=barrier_in
[proxy:0:0@2402-node004] pmi cmd from fd 5: cmd=barrier_in
[proxy:0:0@2402-node004] pmi cmd from fd 4: cmd=put kvsname=kvs_1481562_0 key=-bcast-1-0 value=2F6465762F73686D2F496E74656C5F4D50495F38444B474B6D
[proxy:0:0@2402-node004] PMI response: cmd=put_result rc=0 msg=success
[proxy:0:0@2402-node004] pmi cmd from fd 4: cmd=barrier_in
[proxy:0:0@2402-node004] PMI response: cmd=barrier_out
[proxy:0:0@2402-node004] PMI response: cmd=barrier_out
[proxy:0:0@2402-node004] PMI response: cmd=barrier_out
[proxy:0:0@2402-node004] PMI response: cmd=barrier_out
[proxy:0:0@2402-node004] pmi cmd from fd 5: cmd=get kvsname=kvs_1481562_0 key=-bcast-1-0
[proxy:0:0@2402-node004] PMI response: cmd=get_result rc=0 msg=success value=2F6465762F73686D2F496E74656C5F4D50495F38444B474B6D
[proxy:0:0@2402-node004] pmi cmd from fd 6: cmd=get kvsname=kvs_1481562_0 key=-bcast-1-0
[proxy:0:0@2402-node004] PMI response: cmd=get_result rc=0 msg=success value=2F6465762F73686D2F496E74656C5F4D50495F38444B474B6D
[proxy:0:0@2402-node004] pmi cmd from fd 9: cmd=get kvsname=kvs_1481562_0 key=-bcast-1-0
[proxy:0:0@2402-node004] PMI response: cmd=get_result rc=0 msg=success value=2F6465762F73686D2F496E74656C5F4D50495F38444B474B6D
[proxy:0:0@2402-node004] pmi cmd from fd 9: cmd=barrier_in
[proxy:0:0@2402-node004] pmi cmd from fd 4: cmd=put kvsname=kvs_1481562_0 key=bc-0 value=mpi#03A9EB010400000000000000000080FEFE694A0003D23FB80000000000000000$
[proxy:0:0@2402-node004] PMI response: cmd=put_result rc=0 msg=success
[proxy:0:0@2402-node004] pmi cmd from fd 4: cmd=barrier_in
[proxy:0:0@2402-node004] pmi cmd from fd 5: cmd=barrier_in
[proxy:0:0@2402-node004] pmi cmd from fd 6: cmd=barrier_in
[proxy:0:0@2402-node004] PMI response: cmd=barrier_out
[proxy:0:0@2402-node004] PMI response: cmd=barrier_out
[proxy:0:0@2402-node004] PMI response: cmd=barrier_out
[proxy:0:0@2402-node004] PMI response: cmd=barrier_out
[proxy:0:0@2402-node004] pmi cmd from fd 9: cmd=get kvsname=kvs_1481562_0 key=bc-0
[proxy:0:0@2402-node004] PMI response: cmd=get_result rc=0 msg=success value=mpi#03A9EB010400000000000000000080FEFE694A0003D23FB80000000000000000$
0 :Error: sizex*sizey ne size0size0= 4 sizez= 1
sizey= 120
That error is no where to be found in these forums nor Google.
Link Copied
2 Replies
- Mark as New
- Bookmark
- Subscribe
- Mute
- Subscribe to RSS Feed
- Permalink
- Report Inappropriate Content
This is not an Intel error rather and error with the Tristan application that requires and input file with those dimensions.
However what does this error mean,
if I add flag
-xCORE-AVX512
it says "ifx: command line warning #10121: overriding '-xCORE-AVX512' with '-xCORE-AVX512'"
- Mark as New
- Bookmark
- Subscribe
- Mute
- Subscribe to RSS Feed
- Permalink
- Report Inappropriate Content
@RobbieTheK
that's exactly what the warning says, you have multiple -x options in your compile line, in your case you have at least two times -xCORE-AVX512 defined so it does not change anything.
ifx -xCORE-AVX2 -xCORE-AVX512
That would result in a different warning:
ifx: command line warning #10121: overriding '-xCORE-AVX2' with '-xCORE-AVX512
![](/skins/images/FCBE28625AAD2D8AF3EB3F393BF39703/responsive_peak/images/icon_anonymous_message.png)
Reply
Topic Options
- Subscribe to RSS Feed
- Mark Topic as New
- Mark Topic as Read
- Float this Topic for Current User
- Bookmark
- Subscribe
- Printer Friendly Page