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transiesta compilation

Seema_C_
Beginner
‎04-14-2013 03:18 AM
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Hi

I have installed Intel Parallel studio (2013). I am trying to compile transiesta (SIESTA package) in parallel using intel mkl libraries. For copilation i need blas, lapack, blacs ans scalapack libraries. I am using mpich-3.0.3.

The make file i am using is:

#
# This file is part of the SIESTA package.
#
# Copyright (c) Fundacion General Universidad Autonoma de Madrid:
# E.Artacho, J.Gale, A.Garcia, J.Junquera, P.Ordejon, D.Sanchez-Portal
# and J.M.Soler, 1996- .
#
# Use of this software constitutes agreement with the full conditions
# given in the SIESTA license, as signed by all legitimate users.
#
.SUFFIXES:
.SUFFIXES: .f .F .o .a .f90 .F90

SIESTA_ARCH=i686-pc-linux-gnu--Intel

FPP=
FPP_OUTPUT=
FC=mpif90
RANLIB=ranlib

SYS=nag

SP_KIND=4
DP_KIND=8
KINDS=$(SP_KIND) $(DP_KIND)

FFLAGS=-g
FPPFLAGS= -DFC_HAVE_FLUSH -DFC_HAVE_ABORT
LDFLAGS=

ARFLAGS_EXTRA=

FCFLAGS_fixed_f=
FCFLAGS_free_f90=
FPPFLAGS_fixed_F=
FPPFLAGS_free_F90=

MKLPATH=/opt/intel/mkl/lib/ia32
BLAS_LIBS=/opt/intel/mkl/lib/ia32/libmkl_blas95.a
LAPACK_LIBS=/opt/intel/mkl/lib/ia32/libmkl_lapack95.a
BLACS_LIBS=/opt/intel/mkl/lib/ia32/libmkl_blacs.a
SCALAPACK_LIBS=/opt/intel/mkl/lib/ia32/libmkl_scalapack_core.a

COMP_LIBS=
#dc_lapack.a liblapack.a libblas.a

NETCDF_LIBS=
NETCDF_INTERFACE=

LIBS=$(SCALAPACK_LIBS) $(BLACS_LIBS) $(LAPACK_LIBS) $(BLAS_LIBS) $(NETCDF_LIBS) $(MKLPATH)/libmkl_intel.a $(MKLPATH)/libmkl_pgi_thread.a $(MKLPATH)/libmkl_core.a -lpthread

#SIESTA needs an F90 interface to MPI
#This will give you SIESTA's own implementation
#If your compiler vendor offers an alternative, you may change
#to it here.
MPI_INTERFACE=libmpi_f90.a
MPI_INCLUDE=./include

#Dependency rules are created by autoconf according to whether
#discrete preprocessing is necessary or not.
.F.o:
    $(FC) -c $(FFLAGS) $(INCFLAGS) $(FPPFLAGS) $(FPPFLAGS_fixed_F)  $<
.F90.o:
    $(FC) -c $(FFLAGS) $(INCFLAGS) $(FPPFLAGS) $(FPPFLAGS_free_F90) $<
.f.o:
    $(FC) -c $(FFLAGS) $(INCFLAGS) $(FCFLAGS_fixed_f)  $<
.f90.o:
    $(FC) -c $(FFLAGS) $(INCFLAGS) $(FCFLAGS_free_f90)  $<

I am getting following errors on compilation:

__________________________________________________________________________________________

/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(mkl_threading_mp_ni.o): In function `mkl_serv_get_max_threads':
../../../../serv/kernel/mkl_threading.c:(.text+0xca): undefined reference to `omp_in_parallel'
../../../../serv/kernel/mkl_threading.c:(.text+0x163): undefined reference to `omp_get_max_threads'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(mkl_threading_mp_ni.o): In function `MKL_get_N_Cores':
../../../../serv/kernel/mkl_threading.c:(.text+0x1f2): undefined reference to `omp_get_num_procs'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(mkl_threading_mp_ni.o): In function `mkl_serv_domain_get_max_threads':
../../../../serv/kernel/mkl_threading.c:(.text+0x179a): undefined reference to `omp_in_parallel'
../../../../serv/kernel/mkl_threading.c:(.text+0x182e): undefined reference to `omp_get_max_threads'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(mkl_threading_mp_ni.o): In function `mkl_serv_omp_in_parallel':
../../../../serv/kernel/mkl_threading.c:(.text+0x1931): undefined reference to `omp_in_parallel'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(dgetrf_ib_par.o): In function `mkl_lapack_dgetrf_ib':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:187: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:187: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:187: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:187: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:187: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:225: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:287: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:324: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:324: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:324: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:324: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:324: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/dgetrf_ib_omp.f:342: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(dgetrf_ib_par.o): In function `.STATICS1':
dgetrf_ib_omp_gen.f:(.data+0x4c): undefined reference to `pgf90_compiled'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(zhetd3_par.o): In function `mkl_lapack_zhetd3':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:314: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:332: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:332: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:356: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:467: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:488: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:488: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:512: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(zhetd3_par.o): In function `.STATICS1':
zhetd3_omp_gen.f:(.data+0x44): undefined reference to `pgf90_compiled'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(dsytd3_par.o): In function `mkl_lapack_dsytd3':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:256: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:314: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:332: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:332: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:342: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:356: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:409: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:467: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:488: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:488: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:498: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xsytd3_omp.fxx:512: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(dsytd3_par.o): In function `.STATICS1':
dsytd3_omp_gen.f:(.data+0x34): undefined reference to `pgf90_compiled'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(zlatrd_par.o): In function `mkl_lapack_zlatrd':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:393: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:393: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:393: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:393: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:393: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:490: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:510: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:588: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:588: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:588: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:588: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:588: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:684: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:703: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:762: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:762: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:762: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:762: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:762: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:772: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:792: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:792: undefined reference to `_mp_pexit'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:852: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:852: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:852: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:852: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:852: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:862: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:882: undefined reference to `_mp_barrier2'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_lapack/thr_pgi/./../../../../lapack/kernel/source/xlatrd_omp.fxx:882: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(zlatrd_par.o): In function `.STATICS1':
zlatrd_omp_gen.f:(.data+0x7c): undefined reference to `pgf90_compiled'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(zswap_omp.o): In function `mkl_blas_zswap_omp':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:123: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:140: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(zcopy_omp.o): In function `mkl_blas_zcopy_omp':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:123: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:140: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(zaxpy_omp.o): In function `mkl_blas_zaxpy_omp':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:123: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:140: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(ddot_omp.o): In function `mkl_blas_ddot_omp':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:112: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:112: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:112: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:112: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:123: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:140: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(dcopy_omp.o): In function `mkl_blas_dcopy_omp':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:123: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:140: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_pgi_thread.a(daxpy_omp.o): In function `mkl_blas_daxpy_omp':
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_penter_set'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_lcpu'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `_mp_ncpus'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:116: undefined reference to `omp_get_num_threads'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:123: undefined reference to `omp_get_thread_num'
/nfs/inn/proj/mkl/build/work/1103/nightly_1103_20130312/__work/lnx32/_blas/thr_pgi/./../../../../blas/thread/32/level1/../../common/level1/xf_l1_omp.cxx:140: undefined reference to `_mp_pexit'
/opt/intel/mkl/lib/ia32/libmkl_core.a(xzhetrd.o): In function `mkl_lapack_xzhetrd':
xzhetrd_gen.f:(.text+0x346): undefined reference to `mkl_blas_zher2k'
xzhetrd_gen.f:(.text+0x661): undefined reference to `mkl_blas_zher2k'
/opt/intel/mkl/lib/ia32/libmkl_core.a(xdsytrd.o): In function `mkl_lapack_xdsytrd':
xdsytrd_gen.f:(.text+0x325): undefined reference to `mkl_blas_dsyr2k'
xdsytrd_gen.f:(.text+0x5fc): undefined reference to `mkl_blas_dsyr2k'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zunmtr.o): In function `mkl_lapack_zunmtr':
zunmtr_gen.f:(.text+0x4a2): undefined reference to `mkl_lapack_zunmql'
zunmtr_gen.f:(.text+0x547): undefined reference to `mkl_lapack_zunmqr'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zstedc.o): In function `mkl_lapack_zstedc':
zstedc_gen.f:(.text+0x663): undefined reference to `mkl_lapack_zlaed0'
zstedc_gen.f:(.text+0xa0b): undefined reference to `mkl_lapack_dlaset'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zhegvx.o): In function `mkl_lapack_zhegvx':
zhegvx_gen.f:(.text+0x611): undefined reference to `mkl_blas_ztrmm'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zhegv.o): In function `mkl_lapack_zhegv':
zhegv_gen.f:(.text+0x40d): undefined reference to `mkl_blas_ztrmm'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zhegst.o): In function `mkl_lapack_zhegst':
zhegst_gen.f:(.text+0x2a6): undefined reference to `mkl_blas_ztrmm'
zhegst_gen.f:(.text+0x35a): undefined reference to `mkl_blas_zher2k'
zhegst_gen.f:(.text+0x3f0): undefined reference to `mkl_blas_ztrmm'
zhegst_gen.f:(.text+0x5d2): undefined reference to `mkl_blas_ztrmm'
zhegst_gen.f:(.text+0x68e): undefined reference to `mkl_blas_zher2k'
zhegst_gen.f:(.text+0x730): undefined reference to `mkl_blas_ztrmm'
zhegst_gen.f:(.text+0xb53): undefined reference to `mkl_blas_zher2k'
zhegst_gen.f:(.text+0x1030): undefined reference to `mkl_blas_zher2k'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zgesv.o): In function `mkl_lapack_zgesv':
zgesv_gen.f:(.text+0x96): undefined reference to `mkl_lapack_zgetrf'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dsygvx.o): In function `mkl_lapack_dsygvx':
dsygvx_gen.f:(.text+0x60f): undefined reference to `mkl_blas_dtrmm'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dsygv.o): In function `mkl_lapack_dsygv':
dsygv_gen.f:(.text+0x3d5): undefined reference to `mkl_blas_dtrmm'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dsygst.o): In function `mkl_lapack_dsygst':
dsygst_gen.f:(.text+0x299): undefined reference to `mkl_blas_dtrmm'
dsygst_gen.f:(.text+0x343): undefined reference to `mkl_blas_dsyr2k'
dsygst_gen.f:(.text+0x3dc): undefined reference to `mkl_blas_dtrmm'
dsygst_gen.f:(.text+0x597): undefined reference to `mkl_blas_dtrmm'
dsygst_gen.f:(.text+0x653): undefined reference to `mkl_blas_dsyr2k'
dsygst_gen.f:(.text+0x701): undefined reference to `mkl_blas_dtrmm'
dsygst_gen.f:(.text+0xb13): undefined reference to `mkl_blas_dsyr2k'
dsygst_gen.f:(.text+0xfbb): undefined reference to `mkl_blas_dsyr2k'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dsygs2.o): In function `mkl_lapack_dsygs2':
dsygs2_gen.f:(.text+0x70a): undefined reference to `mkl_blas_dtrsv'
dsygs2_gen.f:(.text+0x95d): undefined reference to `mkl_blas_dtrsv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dsteqr.o): In function `mkl_lapack_dsteqr':
dsteqr_gen.f:(.text+0xd5a): undefined reference to `mkl_lapack_dlasr3'
dsteqr_gen.f:(.text+0x131a): undefined reference to `mkl_lapack_dlasr3'
dsteqr_gen.f:(.text+0x1fd0): undefined reference to `mkl_lapack_dlasr3'
dsteqr_gen.f:(.text+0x2190): undefined reference to `mkl_lapack_dlasr3'
dsteqr_gen.f:(.text+0x2d89): undefined reference to `mkl_lapack_dlasr3'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dsteqr.o):dsteqr_gen.f:(.text+0x3010): more undefined references to `mkl_lapack_dlasr3' follow
/opt/intel/mkl/lib/ia32/libmkl_core.a(dsteqr.o): In function `mkl_lapack_dsteqr':
dsteqr_gen.f:(.text+0x341e): undefined reference to `mkl_lapack_dlaset'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dstedc.o): In function `mkl_lapack_dstedc':
dstedc_gen.f:(.text+0x765): undefined reference to `mkl_lapack_dlaed0'
dstedc_gen.f:(.text+0xa5c): undefined reference to `mkl_lapack_dlaset'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dormtr.o): In function `mkl_lapack_dormtr':
dormtr_gen.f:(.text+0x48f): undefined reference to `mkl_lapack_dormql'
dormtr_gen.f:(.text+0x539): undefined reference to `mkl_lapack_dormqr'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dorgtr.o): In function `mkl_lapack_dorgtr':
dorgtr_gen.f:(.text+0x3e7): undefined reference to `mkl_lapack_dorgql'
dorgtr_gen.f:(.text+0x5af): undefined reference to `mkl_lapack_dorgqr'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx2_zpotrf_u_small.o): In function `mkl_lapack_ps_avx2_zpotrf_u_small':
../../../../lapack_ps/kernel/def/common/zpotrf_u_small.f:(.text+0x3eb): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx2_zpotrf_l_small.o): In function `mkl_lapack_ps_avx2_zpotrf_l_small':
../../../../lapack_ps/kernel/def/common/zpotrf_l_small.f:(.text+0x256): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx2_dpotrf_u_small.o): In function `mkl_lapack_ps_avx2_dpotrf_u_small':
../../../../lapack_ps/kernel/def/common/dpotrf_u_small.f:(.text+0x156): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx2_dpotrf_l_small.o): In function `mkl_lapack_ps_avx2_dpotrf_l_small':
../../../../lapack_ps/kernel/def/common/dpotrf_l_small.f:(.text+0x161): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx_zpotrf_u_small.o): In function `mkl_lapack_ps_avx_zpotrf_u_small':
../../../../lapack_ps/kernel/def/common/zpotrf_u_small.f:(.text+0x37e): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx_zpotrf_l_small.o): In function `mkl_lapack_ps_avx_zpotrf_l_small':
../../../../lapack_ps/kernel/def/common/zpotrf_l_small.f:(.text+0x256): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx_dpotrf_u_small.o): In function `mkl_lapack_ps_avx_dpotrf_u_small':
../../../../lapack_ps/kernel/def/common/dpotrf_u_small.f:(.text+0x156): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx_dpotrf_l_small.o): In function `mkl_lapack_ps_avx_dpotrf_l_small':
../../../../lapack_ps/kernel/def/common/dpotrf_l_small.f:(.text+0x161): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4m3_zpotrf_u_small.o): In function `mkl_lapack_ps_p4m3_zpotrf_u_small':
../../../../lapack_ps/kernel/def/common/zpotrf_u_small.f:(.text+0x219): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4m3_zpotrf_l_small.o): In function `mkl_lapack_ps_p4m3_zpotrf_l_small':
../../../../lapack_ps/kernel/def/common/zpotrf_l_small.f:(.text+0x23c): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4m3_dpotrf_u_small.o): In function `mkl_lapack_ps_p4m3_dpotrf_u_small':
../../../../lapack_ps/kernel/def/common/dpotrf_u_small.f:(.text+0x155): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4m3_dpotrf_l_small.o): In function `mkl_lapack_ps_p4m3_dpotrf_l_small':
../../../../lapack_ps/kernel/def/common/dpotrf_l_small.f:(.text+0x160): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4m_zpotrf_u_small.o): In function `mkl_lapack_ps_p4m_zpotrf_u_small':
../../../../lapack_ps/kernel/def/common/zpotrf_u_small.f:(.text+0x257): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4m_zpotrf_l_small.o): In function `mkl_lapack_ps_p4m_zpotrf_l_small':
../../../../lapack_ps/kernel/def/common/zpotrf_l_small.f:(.text+0x277): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4m_dpotrf_u_small.o): In function `mkl_lapack_ps_p4m_dpotrf_u_small':
../../../../lapack_ps/kernel/def/common/dpotrf_u_small.f:(.text+0x152): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4m_dpotrf_l_small.o): In function `mkl_lapack_ps_p4m_dpotrf_l_small':
../../../../lapack_ps/kernel/def/common/dpotrf_l_small.f:(.text+0x154): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4p_zpotrf_u_small.o): In function `mkl_lapack_ps_p4p_zpotrf_u_small':
../../../../lapack_ps/kernel/def/common/zpotrf_u_small.f:(.text+0x257): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4p_zpotrf_l_small.o): In function `mkl_lapack_ps_p4p_zpotrf_l_small':
../../../../lapack_ps/kernel/def/common/zpotrf_l_small.f:(.text+0x277): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4p_dpotrf_u_small.o): In function `mkl_lapack_ps_p4p_dpotrf_u_small':
../../../../lapack_ps/kernel/def/common/dpotrf_u_small.f:(.text+0x152): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4p_dpotrf_l_small.o): In function `mkl_lapack_ps_p4p_dpotrf_l_small':
../../../../lapack_ps/kernel/def/common/dpotrf_l_small.f:(.text+0x154): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4_zpotrf_u_small.o): In function `mkl_lapack_ps_p4_zpotrf_u_small':
../../../../lapack_ps/kernel/def/common/zpotrf_u_small.f:(.text+0x257): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4_zpotrf_l_small.o): In function `mkl_lapack_ps_p4_zpotrf_l_small':
../../../../lapack_ps/kernel/def/common/zpotrf_l_small.f:(.text+0x277): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4_dpotrf_u_small.o): In function `mkl_lapack_ps_p4_dpotrf_u_small':
../../../../lapack_ps/kernel/def/common/dpotrf_u_small.f:(.text+0x153): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4_dpotrf_l_small.o): In function `mkl_lapack_ps_p4_dpotrf_l_small':
../../../../lapack_ps/kernel/def/common/dpotrf_l_small.f:(.text+0x155): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4p_xzgemm.o): In function `mkl_blas_p4p_xzgemm':
../../../../blas/kernel/p4p/level3/32/xzgemm.c:(.text+0x91b): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/p4p/level3/32/xzgemm.c:(.text+0xea7): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/p4p/level3/32/xzgemm.c:(.text+0x1425): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/p4p/level3/32/xzgemm.c:(.text+0x19b6): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/p4p/level3/32/xzgemm.c:(.text+0x1f2d): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4p_xzgemm.o):../../../../blas/kernel/p4p/level3/32/xzgemm.c:(.text+0x249e): more undefined references to `mkl_blas_zgemv' follow
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4p_xdgemm.o): In function `mkl_blas_p4p_xdgemm':
../../../../blas/kernel/p4p/level3/32/xdgemm.c:(.text+0x75e): undefined reference to `mkl_blas_dgemv'
../../../../blas/kernel/p4p/level3/32/xdgemm.c:(.text+0xc0a): undefined reference to `mkl_blas_dgemv'
../../../../blas/kernel/p4p/level3/32/xdgemm.c:(.text+0x10b8): undefined reference to `mkl_blas_dgemv'
../../../../blas/kernel/p4p/level3/32/xdgemm.c:(.text+0x1536): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4_xzgemm.o): In function `mkl_blas_p4_xzgemm':
../../../../blas/kernel/p4/level3/32/xzgemm.c:(.text+0x91e): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/p4/level3/32/xzgemm.c:(.text+0xeaa): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/p4/level3/32/xzgemm.c:(.text+0x1428): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/p4/level3/32/xzgemm.c:(.text+0x19b9): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/p4/level3/32/xzgemm.c:(.text+0x1f30): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4_xzgemm.o):../../../../blas/kernel/p4/level3/32/xzgemm.c:(.text+0x24a1): more undefined references to `mkl_blas_zgemv' follow
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4_xdgemm.o): In function `mkl_blas_p4_xdgemm':
../../../../blas/kernel/p4/level3/32/xdgemm.c:(.text+0x4f9): undefined reference to `mkl_blas_dgemv'
../../../../blas/kernel/p4/level3/32/xdgemm.c:(.text+0x6f0): undefined reference to `mkl_blas_dgemv'
../../../../blas/kernel/p4/level3/32/xdgemm.c:(.text+0x8c1): undefined reference to `mkl_blas_dgemv'
../../../../blas/kernel/p4/level3/32/xdgemm.c:(.text+0xaae): undefined reference to `mkl_blas_dgemv'
../../../../blas/kernel/p4/level3/32/xdgemm.c:(.text+0xcd7): undefined reference to `mkl_blas_dgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_p4_xdgemm.o):../../../../blas/kernel/p4/level3/32/xdgemm.c:(.text+0xf27): more undefined references to `mkl_blas_dgemv' follow
/opt/intel/mkl/lib/ia32/libmkl_core.a(zungtr.o): In function `mkl_lapack_zungtr':
zungtr_gen.f:(.text+0x413): undefined reference to `mkl_lapack_zungql'
zungtr_gen.f:(.text+0x5f0): undefined reference to `mkl_lapack_zungqr'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zsteqr.o): In function `mkl_lapack_zsteqr':
zsteqr_gen.f:(.text+0xd41): undefined reference to `mkl_lapack_dlasr3'
zsteqr_gen.f:(.text+0x12fb): undefined reference to `mkl_lapack_dlasr3'
zsteqr_gen.f:(.text+0x1fb3): undefined reference to `mkl_lapack_dlasr3'
zsteqr_gen.f:(.text+0x216d): undefined reference to `mkl_lapack_dlasr3'
zsteqr_gen.f:(.text+0x2d54): undefined reference to `mkl_lapack_dlasr3'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zsteqr.o):zsteqr_gen.f:(.text+0x2fd5): more undefined references to `mkl_lapack_dlasr3' follow
/opt/intel/mkl/lib/ia32/libmkl_core.a(zsteqr.o): In function `mkl_lapack_zsteqr':
zsteqr_gen.f:(.text+0x33d7): undefined reference to `mkl_lapack_zlaset'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zherdb.o): In function `mkl_lapack_zherdb':
zherdb_gen.f:(.text+0x83f): undefined reference to `mkl_blas_zher2k'
zherdb_gen.f:(.text+0xdf1): undefined reference to `mkl_lapack_zungql'
zherdb_gen.f:(.text+0x13bd): undefined reference to `mkl_blas_zher2k'
zherdb_gen.f:(.text+0x198b): undefined reference to `mkl_lapack_zungqr'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zhbrdb.o): In function `mkl_lapack_zhbrdb':
zhbrdb_gen.f:(.text+0x2ad): undefined reference to `mkl_lapack_zlaset'
zhbrdb_gen.f:(.text+0x32b): undefined reference to `mkl_lapack_zlaset'
zhbrdb_gen.f:(.text+0x1a78): undefined reference to `mkl_lapack_zlaeh2'
zhbrdb_gen.f:(.text+0x1b1d): undefined reference to `mkl_lapack_zlaset'
zhbrdb_gen.f:(.text+0x2bd2): undefined reference to `mkl_lapack_zlaeh2'
/opt/intel/mkl/lib/ia32/libmkl_core.a(zgetrs.o): In function `mkl_lapack_zgetrs':
zgetrs_gen.f:(.text+0x13c): undefined reference to `mkl_lapack_zlaswp'
zgetrs_gen.f:(.text+0x2b7): undefined reference to `mkl_lapack_zlaswp'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dtrtri.o): In function `mkl_lapack_dtrtri':
dtrtri_gen.f:(.text+0x370): undefined reference to `mkl_blas_dtrmm'
dtrtri_gen.f:(.text+0x570): undefined reference to `mkl_blas_dtrmm'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dsyrdb.o): In function `mkl_lapack_dsyrdb':
dsyrdb_gen.f:(.text+0x787): undefined reference to `mkl_blas_dsyr2k'
dsyrdb_gen.f:(.text+0xd49): undefined reference to `mkl_lapack_dorgql'
dsyrdb_gen.f:(.text+0x12cc): undefined reference to `mkl_blas_dsyr2k'
dsyrdb_gen.f:(.text+0x1850): undefined reference to `mkl_lapack_dorgqr'
/opt/intel/mkl/lib/ia32/libmkl_core.a(dsbrdb.o): In function `mkl_lapack_dsbrdb':
dsbrdb_gen.f:(.text+0x299): undefined reference to `mkl_lapack_dlaset'
dsbrdb_gen.f:(.text+0x309): undefined reference to `mkl_lapack_dlaset'
dsbrdb_gen.f:(.text+0x1749): undefined reference to `mkl_lapack_dlaeh2'
dsbrdb_gen.f:(.text+0x1809): undefined reference to `mkl_lapack_dlaset'
dsbrdb_gen.f:(.text+0x2636): undefined reference to `mkl_lapack_dlaeh2'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx2_ztrsv.o): In function `mkl_blas_avx2_ztrsv':
../../../../blas/kernel/avx2/level2/32/ztrsv.f:(.text+0x223): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/avx2/level2/32/ztrsv.f:(.text+0x36a): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/avx2/level2/32/ztrsv.f:(.text+0x4f1): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/avx2/level2/32/ztrsv.f:(.text+0x677): undefined reference to `mkl_blas_zgemv'
../../../../blas/kernel/avx2/level2/32/ztrsv.f:(.text+0x7d9): undefined reference to `mkl_blas_zgemv'
/opt/intel/mkl/lib/ia32/libmkl_core.a(_avx2_ztrsv.o):../../../../blas/kernel/avx2/level2/32/ztrsv.f:(.text+0x908): more undefined references to `mkl_blas_zgemv' follow
make: *** [transiesta] Error 1
_________________________________________________________________________________________________________

Kindly help

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SergeyKostrov
Valued Contributor II
‎04-14-2013 03:54 PM
536 Views
>>../../serv/kernel/mkl_threading.c:(.text+0xca): undefined reference to 'omp_in_parallel' >>... I see that something is wrong with MKL libraries. For example, omp_in_parallel function should be defined in libmkl_pgi_thread.a but there is an error anyway ( see above ). Please verify a part in the makefile ...$(MKLPATH)/libmkl_intel.a $(MKLPATH)/libmkl_pgi_thread.a $(MKLPATH)/libmkl_core.a... responsible for MKL libraries.
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SergeyKostrov
Valued Contributor II
‎04-14-2013 03:58 PM
536 Views
Update: It looks like MKL headers are Not included. Sorry for my previous post.
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