-dynamic: No such file or directory After Xcode update

Peter_M_1 · ‎09-25-2014

Hi,

Yesterday I was compiling some fortran code no problem on my mac. Today I performed a system update via the Mac App Store.

After this now when I try and compile the same code using the same command as yesterday I get ..

ifort -assume realloc-lhs triangle_cant_g.f90 -o cant

-dynamic: No such file or directory

There was a command line tools update, and an Xcode update, to version 6.0.1, as well as an Mac OS X update ...

Is any one else having these problems, I tried running

source /opt/intel/bin/ifortvars.sh intel64

But this didn't help. Thanks, Peter

Steven_L_Intel1 · ‎09-25-2014

I don't remember your mentioning an Xcode update on StackOverflow. If you change Xcode versions, you MUST reinstall Intel Fortran. That said, we don't yet support Xcode 6.

Peter_M_1 · ‎09-25-2014

Stackoverflow ? I've not posted this there, are there other people having similar problems ? Do you have a link to the SO post ?

I wasn't aware Xcode 6 was unsupported, this however wasn't an update to a major version, rather an update too 6.0.1. It's pretty disappointing if I have to reinstall all the intel compilers every time there's a minor update...

Steven_L_Intel1 · ‎09-25-2014

Sorry - I thought I had seen it there. Somewhere else...

Yes, unfortunately, you do often need to reinstall after each Xcode update. Apple likes to pretend that nobody uses any software that doesn't come from Apple and Xcode updates often wipe out our integration. Some updates might not need this, but it is our general advice.

I'll let our Mac experts comment on your specific problem.

Ron_Green · ‎09-25-2014

I have that same OS and Xcode version: OS X 10.9.5 and Xcode 6.0.1. I've not had any issues.

the source you have is wrong - needs to be

source /opt/intel/bin/compilervars.sh intel64

-dynamic is an argument we pass to the system linker 'ld'. Do this to see what linker you have: here is what I see what do you see?

$ which ld

/usr/bin/ld

rwgreen-mac03:~ rwgreen$ ld -v

@(#)PROGRAM:ld PROJECT:ld64-241.8

configured to support archs: armv6 armv7 armv7s arm64 i386 x86_64 x86_64h armv6m armv7m armv7em

LTO support using: LLVM version 3.5svn

Now what I want you to do is compile with option -#

source /opt/intel/bin/compilervars.sh

ifort -# -assume realloc-lhs triangle_cant_g.f90 -o cant

Show me the full output from this command

ron

Peter_M_1 · ‎09-25-2014

Peters-MacBook-Pro:tri_fem_140925 Peter$ source /opt/intel/bin/compilervars.sh intel64

Peters-MacBook-Pro:tri_fem_140925 Peter$ ifort -# -assume realloc-lhs triangle_cant_g.f90 -o cant

/usr/bin/ifort-14.0-base/bin/intel64/fortcom \

-D__INTEL_COMPILER=1400 \

-D__INTEL_COMPILER_UPDATE=3 \

-D__x86_64 \

-D__x86_64__ \

-D_MT \

-D__INTEL_COMPILER_BUILD_DATE=20140415 \

-D__PIC__ \

-D__APPLE__ \

-D__MACH__ \

-D__pentium4 \

-D__pentium4__ \

-D__tune_pentium4__ \

-D__SSE2__ \

-D__SSE3__ \

-D__SSSE3__ \

-D__SSE__ \

-D__MMX__ \

-mGLOB_pack_sort_init_list \

-I. \

-I/opt/intel/composer_xe_2013_sp1.3.166/ipp/include \

-I/opt/intel/composer_xe_2013_sp1.3.166/mkl/include \

-I/opt/intel/composer_xe_2013_sp1.3.168/tbb/include \

-I/opt/intel/composer_xe_2013_sp1.3.166/ipp/include \

-I/opt/intel/composer_xe_2013_sp1.3.166/mkl/include \

-I/opt/intel/composer_xe_2013_sp1.3.168/tbb/include \

-I/usr/bin/ifort-14.0-base/compiler/include/intel64 \

-I/usr/bin/ifort-14.0-base/compiler/include \

-I/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/6.0/include \

-I/usr/local/include \

-I/usr/include \

"-assume realloc_lhs" \

-O2 \

-simd \

-mP1OPT_version=14.0-intel64 \

-mGLOB_diag_file=/var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortJBHJbk.diag \

-mGLOB_diag_use_message_catalog=FALSE \

-mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 \

-mP2OPT_static_promotion \

-mP1OPT_print_version=FALSE \

-mCG_use_gas_got_workaround=F \

-mP2OPT_align_option_used=TRUE \

-mGLOB_gcc_version=481 \

"-mGLOB_options_string=-# -assume realloc-lhs -o cant" \

-mGLOB_position_independent_code \

-mGLOB_preemption_model=1 \

-mGLOB_no_compact_unwind=TRUE \

-mGLOB_cxx_limited_range=FALSE \

-mCG_extend_parms=FALSE \

-mGLOB_compiler_bin_directory=/usr/bin/ifort-14.0-base/bin/intel64 \

-mGLOB_as_output_backup_file_name=/var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortTaZ0JUas_.s \

-mIPOPT_activate \

-mIPOPT_lite \

-mGLOB_em64t \

-mGLOB_instruction_tuning=0x0 \

-mGLOB_product_id_code=0x22006d8f \

-mCG_bnl_movbe=T \

-mGLOB_extended_instructions=0x80 \

-mP3OPT_use_mspp_call_convention \

-mP2OPT_subs_out_of_bound=FALSE \

-mGLOB_ansi_alias \

-mPGOPTI_value_profile_use=T \

-mP2OPT_il0_array_sections=TRUE \

-mP2OPT_hlo_level=2 \

-mP2OPT_hlo \

-mP2OPT_hpo_rtt_control=0 \

-mIPOPT_args_in_regs=0 \

-mP2OPT_disam_assume_nonstd_intent_in=FALSE \

-mGLOB_imf_mapping_library=/usr/bin/ifort-14.0-base/bin/intel64/libiml_attr.dylib \

-mIPOPT_obj_output_file_name=/var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortJBHJbk.o \

-mIPOPT_whole_archive_fixup_file_name=/var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortwarchHP4P1E \

-mGLOB_long_size_64 \

-mGLOB_routine_pointer_size_64 \

-mGLOB_driver_tempfile_name=/var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/iforttempfile446ru3 \

-mGLOB_os_target=GLOB_OS_TARGET_MACH \

-mGLOB_async_unwind_tables=TRUE \

-mGLOB_obj_output_file=/var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortJBHJbk.o \

-mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN \

-mP1OPT_source_file_name=triangle_cant_g.f90 \

-mP2OPT_symtab_type_copy=true \

triangle_cant_g.f90

/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld \

-dynamic \

-arch \

x86_64 \

-weak_reference_mismatches \

non-weak \

-macosx_version_min \

10.9.5 \

-no_compact_unwind \

-o \

cant \

/usr/bin/ifort-14.0-base/compiler/lib/for_main.o \

-L/opt/intel/composer_xe_2013_sp1.3.168/compiler/lib \

-L/opt/intel/composer_xe_2013_sp1.3.166/ipp/../compiler/lib \

-L/opt/intel/composer_xe_2013_sp1.3.166/ipp/lib \

-L/opt/intel/composer_xe_2013_sp1.3.166/compiler/lib \

-L/opt/intel/composer_xe_2013_sp1.3.166/mkl/lib \

-L/opt/intel/composer_xe_2013_sp1.3.168/tbb/lib \

-L/opt/intel/composer_xe_2013_sp1.3.168/compiler/lib \

-L/opt/intel/composer_xe_2013_sp1.3.166/ipp/../compiler/lib \

-L/opt/intel/composer_xe_2013_sp1.3.166/ipp/lib \

-L/opt/intel/composer_xe_2013_sp1.3.166/compiler/lib \

-L/opt/intel/composer_xe_2013_sp1.3.166/mkl/lib \

-L/opt/intel/composer_xe_2013_sp1.3.168/tbb/lib \

-L/usr/bin/ifort-14.0-base/compiler/lib \

-L/usr/lib \

/var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortJBHJbk.o \

/usr/bin/ifort-14.0-base/compiler/lib/libifport.a \

/usr/bin/ifort-14.0-base/compiler/lib/libifcore.a \

/usr/bin/ifort-14.0-base/compiler/lib/libimf.a \

/usr/bin/ifort-14.0-base/compiler/lib/libsvml.a \

/usr/bin/ifort-14.0-base/compiler/lib/libipgo.a \

-lSystem \

/usr/bin/ifort-14.0-base/compiler/lib/libirc.a \

-lpthread \

/usr/bin/ifort-14.0-base/compiler/lib/libsvml.a \

/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/6.0/lib/darwin/libclang_rt.osx.a

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortxcrunz5o57Z

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortxcrunrHshSA

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortxcrund3HTIx

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortxcrun0Xgmft

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortgnudirsjF3HOU

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortxcrunOhg1Dj

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortclangdashv4TEuo6

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortJBHJbk.o

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortosGts2iH

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/iforttosiBLayz

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortTaZ0JUas_.s

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/iforttempfile446ru3

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortargj95LLk

rm /var/folders/l1/xy86_dd92x3d3sb460g5czpr0000gn/T/ifortJBHJbk.o

Peters-MacBook-Pro:tri_fem_140925 Peter$ ifort -assume realloc-lhs triangle_cant_g.f90 -o cant

ld: warning: directory not found for option '-L/opt/intel/composer_xe_2013_sp1.3.168/compiler/lib'

Although it now appears to compile, although with these new warnings I did not get previously..

Ron_Green · ‎09-25-2014

well the above is helpful but note that -# shows all the steps the compiler WOULD DO, but it doesn't actually compile anything.

BUT I think I see what's happening. So you installed Xcode 6.0.1 the other day. Since then, have you actually started the Xcode application? From your Applications folder start XCode. There is a new step after installing 6.0.1 that requires you to accept a license agreement before it finishing downloading and installing all the command line tools.

So run the Xcode app, accept the license agreement, let it install things, then try the compile again without the -#.

Also, bring up Xcode, go to menu Preferences. When the Preferences window comes up, go to the Downloads icon/tab. It should look like this:

Peter_M_1 · ‎09-25-2014

Ah ha interesting!
I hadn't actually opened Xcode, since I never use it. It started to work again after I fell back to gfortran to do some work. When I attempted to compile with gfortran it told me to run it as sudo, and accept the new Xcode user agreement.

The next time I tried to use ifort, it worked, with the exception of this message

ld: warning: directory not found for option '-L/opt/intel/composer_xe_2013_sp1.3.168/compiler/lib'

ld: warning: directory not found for option '-L/opt/intel/composer_xe_2013_sp1.3.168/compiler/lib'

But it compiles and seems to run ok, so I can live with this just now, thanks a lot!

Peter

Ron_Green · ‎09-25-2014

As Steve said, I think you need to re-install the latest IFORT compiler so that it'll look for the libraries from the directories of the new compiler and not your old one.

ron