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Hi,
I am not pretty sure about this, but it might work. its best to use the version of NIOS II EDS which comes along with the Quartus II v 9 download. The EDS reads the .sopcinfo file and generates the BSP. If there is a version mismatch, there might be errors in this step. I would suggest to go with the version that comes automatically with Quartus download in case you dont already have other versions installed. Thanks
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