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LAMMPS 2017 compilation with intel parallel studio XE 2015

Afshin_A_
Beginner
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Dear users and developers, Recently, I tried to compile and install LAMMPS-latest release on Ubuntu 16.04 and I exactly followed the instruction given in: https://linuxcluster.wordpress.com/2016/06/14/compiling-lammps-14may16-with-intel-15-0-6-and-intel-m... I have installed intel parallel studio 2015 XE and I've edited my .bashrc file to include mpiiifort, mpiicc and mpiicpc as my default compilers. Also, I used the following command to compile lammps with intel Makefile: make intel_cpu_intelmpi -j 8 but unfortunately, during final steps of compilation I face with this particular error given at the end of this email. I googled to find out what was the problem and it seems that there is a conflict between Linux default mpicxx wrapper and the one provided by intel mpicpc. In another community (GPAW), it was suggested that all the links that include openmp should be deleted in Makefile so this conflict never happens. But as I searched in .../Makefile & .../MAKE/OPTIONS/Makefile.intel_cpu, I couldn't find the specific lines pointing to shared libraries that cause this conflict. Can you help me solve this problem? Also, I've succefully installed several other unix-based packages such as VASP, Quantum Espresso, Prophet and ... with my current OS, so I believe my compilers are okay. ---- error part of compilation mpiicpc -g -qopenmp -xHost -O2 -fp-model fast=2 -no-prec-div -qoverride-limits -L../../lib/reax -L../../lib/poems -L../../lib/meam -L/opt/intel/fce/10.0.023/lib pair_lj_gromacs_coul_gromacs_omp.o nstencil_half_bin_3d_newtoff.o dihedral_opls_intel.o npair_half_size_nsq_newtoff.o pppm_disp_intel.o pair_buck.o fix_controller.o fix_drag.o pair_adp.o fix_nph_body.o pair_resquared_omp.o pair_lj_cut_coul_dsf_omp.o pair_buck_coul_cut_omp.o pair_rebo.o fix_temp_csvr.o npair_full_multi.o lattice.o fix_rigid_nve.o displace_atoms.o npair_full_nsq.o pair_lj_cut_omp.o pppm_cg_omp.o molecule.o pair_buck_coul_long.o pair_tip4p_long_omp.o compute_angle_local.o region_plane.o fix_srd.o dihedral_opls.o npair_half_respa_nsq_newtoff_omp.o fix_append_atoms.o pair_born_coul_long_cs.o create_box.o bond_quartic_omp.o compute_com.o output.o angle_harmonic.o compute_temp_sphere.o nstencil_half_ghost_bin_2d_newtoff.o update.o angle_harmonic_omp.o pair_coul_cut_omp.o image.o bond.o fix_npt_asphere.o fix_bond_create.o pair_tersoff_mod_c_omp.o fix_wall.o fix_omp.o pair_gw_zbl.o pair_beck.o pair_lj_cubic_omp.o pair_nm_cut_coul_cut.o fix_rigid_nh_small.o fix_nphug_omp.o pair_lj_charmm_coul_charmm_implicit.o pppm_cg.o random_mars.o improper_cvff_omp.o npair_half_size_bin_newton_tri_omp.o npair_half_respa_bin_newton_tri_omp.o npair_half_nsq_newtoff.o memory.o fix_ave_time.o fix_nve.o pair_lj_class2_coul_cut.o pair_gw.o comm_brick.o pair_lj_charmm_coul_long_intel.o timer.o pair_vashishta_table_omp.o npair_full_bin_atomonly.o dump.o compute_temp_cs.o pair_lj_cut_tip4p_long_opt.o compute_erotate_asphere.o angle_cosine_omp.o nstencil_half_ghost_bin_3d_newtoff.o min_quickmin.o dihedral_charmm.o dump_xtc.o compute_rigid_local.o improper_zero.o compute_contact_atom.o bond_nonlinear_omp.o region_sphere.o pair_lubricateU_poly.o region_intersect.o fix_restrain.o fix_langevin.o finish.o compute_angmom_chunk.o body.o dihedral.o bond_nonlinear.o fix_evaporate.o fix.o fix_nph_asphere_omp.o neigh_list.o fix_ave_correlate.o compute_msd_chunk.o compute_sna_atom.o npair_full_bin.o compute_dilatation_atom.o pppm_tip4p_omp.o fix_rigid_nvt_omp.o npair_half_size_bin_newtoff_omp.o npair_half_respa_bin_newtoff_omp.o compute_reduce.o fix_rigid_npt_small.o region.o improper.o fix_store_state.o fix_nvt_intel.o pair_lj96_cut.o compute_plasticity_atom.o pair_nm_cut_coul_long.o nstencil_half_bin_2d_newton.o pair_tersoff_intel.o compute_cna_atom.o improper_hybrid.o npair_half_respa_nsq_newton.o create_bonds.o fix_temp_rescale.o pair_lubricateU.o neighbor.o fix_spring_rg.o dump_custom_mpiio.o pair_tersoff_mod_c.o fix_rigid_nph_small.o pair_polymorphic.o write_restart.o fix_vector.o fix_nve_asphere_noforce.o dihedral_multi_harmonic.o nbin.o write_coeff.o fix_nph_asphere.o min_cg.o fix_halt.o pppm_omp.o procmap.o compute_gyration.o pppm_tip4p.o npair_half_size_bin_newtoff.o npair_half_respa_bin_newtoff.o pair_lj_cut_coul_long_intel.o bond_table_omp.o fix_orient_bcc.o dihedral_class2_omp.o pair_lj_long_dipole_long.o compute_erotate_sphere.o dihedral_opls_omp.o compute_temp_profile.o npair_half_bin_newton_intel.o math_special.o angle_harmonic_intel.o pair_resquared.o ntopo_dihedral_template.o pair_eam_alloy_omp.o pair_rebo_omp.o npair_half_bin_newtoff_omp.o compute_vacf.o fix_rigid_nve_omp.o fix_ave_histo.o npair_full_nsq_omp.o fix_rigid_nvt.o reader_xyz.o pair_buck_coul_long_omp.o improper_harmonic_intel.o npair_full_bin_atomonly_omp.o npair_full_bin_ghost.o npair_halffull_newton_omp.o pair_dsmc.o angle_cosine.o pair_lj_cut_dipole_cut_omp.o fix_deform.o pair_lj_charmm_coul_charmm.o dump_cfg_mpiio.o atom.o thr_omp.o nstencil_half_multi_2d_newton.o pair_born_coul_long_omp.o fix_wall_harmonic.o pair_lj_expand_omp.o ewald_disp.o pair_lj_cut_dipole_long.o compute_chunk_atom.o compute_ke_atom.o pppm_intel.o math_extra.o compute_ke_rigid.o tad.o pair_gauss.o fix_rigid_nve_small.o pair_soft.o pair_eam_omp.o nstencil_full_multi_3d.o pair_gran_hertz_history_omp.o fix_poems.o fix_atom_swap.o library.o npair_half_size_bin_newton_omp.o npair_half_respa_bin_newton_omp.o bond_fene_omp.o fix_rigid_nh.o compute_temp_body.o pair_lj_long_coul_long_omp.o fix_spring_self.o dihedral_multi_harmonic_omp.o fix_nve_noforce.o pair_hybrid.o npair_half_multi_newtoff_omp.o pair_lj_charmm_coul_msm_omp.o angle_hybrid.o compute_angle.o fix_shear_history.o fix_planeforce.o pair_lj_cut_coul_cut_omp.o npair_half_nsq_newtoff_omp.o compute_pressure.o fix_gcmc.o nstencil_half_multi_3d_newton.o npair_skip_size_off2on.o min_hftn.o improper_class2.o fix_nvt_asphere_omp.o pair_zero.o compute_temp_region.o pair_vashishta_omp.o fix_qeq_comb.o fix_wall_srd.o fix_nh_omp.o fix_event_prd.o pair_buck_intel.o pair_mie_cut.o fix_nve_limit.o atom_vec.o dihedral_harmonic_omp.o pair_tersoff_zbl.o bond_hybrid.o pair_lj_long_coul_long.o improper_umbrella_omp.o compute_stress_atom.o fix_respa.o integrate.o angle_cosine_delta_omp.o fix_cmap.o pair_coul_msm_omp.o pair_eam.o npair_halffull_newtoff_omp.o angle_class2_omp.o fix_shake.o dump_image.o pair_tip4p_cut_omp.o npair_half_respa_bin_newton.o pair_buck_coul_long_intel.o compute_property_atom.o npair_half_bin_newton_tri_omp.o compute_temp.o compute_temp_asphere.o pair_buck_omp.o atom_vec_line.o pair_lj_cut_coul_long_cs.o msm_cg.o npair_half_multi_newtoff.o pair_tip4p_long.o fix_ttm.o pair_nm_cut_omp.o delete_atoms.o ntopo_dihedral_partial.o pair_sw.o npair_half_multi_newton_tri.o pair_lj_long_tip4p_long_omp.o compute_dihedral.o fix_python.o dihedral_charmmfsw.o fix_nvt_asphere.o pair_tersoff_zbl_omp.o npair_half_bin_newtoff_ghost.o compute_event_displace.o compute_body_local.o compute_improper_local.o prd.o compute_msd_nongauss.o sna.o fix_gld.o compute_ke.o npair_half_respa_bin_newton_tri.o npair_half_size_nsq_newton_omp.o compute_group_group.o atom_vec_molecular.o angle_cosine_squared.o fix_group.o pair_buck_coul_cut_intel.o angle_zero.o fix_dt_reset.o fix_qeq_point.o pair_lj_class2.o atom_vec_angle.o angle_class2.o pair_lj_charmm_coul_charmm_omp.o pair_airebo.o pair_snap.o pair_hbond_dreiding_morse.o npair_half_bin_newton_tri.o pair_lj_class2_coul_cut_omp.o dump_local.o fix_event.o pair_coul_wolf_omp.o pair_coul_long.o pair_gauss_omp.o write_data.o pair_lj_class2_coul_long.o fix_ave_histo_weight.o bond_harmonic_intel.o fix_nvt_sphere_omp.o pair_gran_hooke_history_omp.o improper_harmonic_omp.o pppm_disp_tip4p_omp.o universe.o npair_full_bin_ghost_omp.o fix_external.o compute_vcm_chunk.o compute_property_chunk.o pair_python.o pair_nm_cut.o special.o npair_half_respa_nsq_newton_omp.o compute_reduce_region.o ntopo_bond_all.o improper_umbrella.o domain.o fix_intel.o dump_atom_gz.o npair_copy.o pair_lj_cut_tip4p_long_omp.o verlet_lrt_intel.o ntopo_angle_partial.o npair_intel.o fix_qeq_fire.o nbin_standard.o pair_lj_expand.o improper_cvff_intel.o fix_wall_piston.o pair_tri_lj.o bond_quartic.o imbalance_var.o ntopo_improper_all.o pair_peri_eps.o fix_nve_tri.o compute_dihedral_local.o fix_oneway.o fix_wall_colloid.o change_box.o pair_born_omp.o region_prism.o nstencil_half_bin_3d_newton.o pair_coul_streitz.o fix_spring_chunk.o angle_cosine_squared_omp.o pppm_disp_tip4p.o improper_class2_omp.o pair_lj_smooth.o atom_vec_bond.o pair_lj_long_tip4p_long.o nstencil_full_multi_2d.o pair_lj_long_coul_long_intel.o comm_tiled.o pair_hybrid_overlay.o comm.o compute_damage_atom.o pair_lj_cut.o fix_minimize.o read_dump.o thermo.o run.o group.o fix_nve_sphere_omp.o pair_lj_charmm_coul_long.o bond_harmonic_omp.o fix_balance.o ntopo_angle_template.o fix_nvt.o pair_coul_wolf.o fix_wall_gran_omp.o fix_heat.o pair_lj_cut_coul_msm_omp.o fix_adapt.o dump_atom_mpiio.o pair_nm_cut_coul_long_omp.o pair_lj_cut_intel.o pair_lj_cut_tip4p_cut_omp.o fix_temp_berendsen.o fix_rigid_small_omp.o fix_rattle.o fix_npt_omp.o pair_born.o pair_buck_coul_msm_omp.o pair_lj_cut_tip4p_long.o nstencil_full_bin_2d.o fix_ave_chunk.o pair_lj_cut_coul_debye_omp.o compute_msd.o fix_nve_omp.o fix_nve_body.o pair_gayberne_intel.o fix_viscosity.o dihedral_class2.o fix_qeq_dynamic.o fix_viscous.o pair_morse_opt.o fix_wall_region.o pppm_disp.o min_fire.o pair_born_coul_long.o fix_qeq_comb_omp.o pair_vashishta.o pair_gayberne.o npair_full_nsq_ghost.o fix_move.o fix_nve_sphere.o bond_harmonic.o remap.o region_cone.o dump_custom_gz.o pair_dpd_tstat_omp.o npair_full_bin_intel.o fix_nve_asphere.o fix_wall_gran.o pair_peri_pmb.o pair_lj_cut_coul_msm.o fix_bond_break.o pair_coul_long_omp.o dump_cfg_gz.o pair_coul_msm.o fix_rigid_small.o npair_full_nsq_ghost_omp.o create_atoms.o pppm.o imbalance_neigh.o neb.o dump_xyz.o write_dump.o ntopo.o gridcomm.o atom_map.o replicate.o ntopo_angle_all.o pair_lj_charmm_coul_msm.o angle_cosine_periodic_omp.o imbalance_store.o pair_comb_omp.o fix_indent.o fix_rigid_nph_omp.o angle_charmm_omp.o fix_deposit.o modify.o pair_buck_long_coul_long_omp.o fix_spring.o angle_cosine_delta.o fix_nvt_sllod_intel.o compute_erotate_sphere_atom.o pair_sw_omp.o input.o rcb.o balance.o fix_npt_sphere_omp.o fix_pour.o fix_property_atom.o msm_cg_omp.o pair_lj_cut_coul_dsf.o compute_global_atom.o pair_lj_gromacs_omp.o pair_eam_opt.o fix_nve_line.o atom_vec_charge.o npair_full_multi_omp.o remap_wrap.o error.o pair_lj_cubic.o fix_nvt_omp.o compute_displace_atom.o npair.o pair_body.o compute_snad_atom.o npair_half_bin_newton.o pair_coul_debye_omp.o verlet_split.o main.o improper_cvff.o nstencil_half_multi_3d_newtoff.o velocity.o nstencil_full_bin_3d.o pair_airebo_morse_omp.o region_union.o pair_peri_lps_omp.o angle_charmm.o citeme.o fix_npt.o fix_npt_asphere_omp.o fix_orient_fcc.o compute_inertia_chunk.o pair_buck_long_coul_long.o fix_nh_sphere_omp.o npair_half_multi_newton_tri_omp.o fix_addforce.o fix_bond_swap.o pair_gayberne_omp.o random_park.o set.o pair_hbond_dreiding_lj.o fix_npt_sphere.o region_cylinder.o compute_rdf.o pair_brownian_poly_omp.o compute_erotate_rigid.o npair_full_bin_omp.o pair_lj_gromacs.o compute_bond.o pair_lj_charmmfsw_coul_long.o pair_morse_omp.o fix_lineforce.o pair_hbond_dreiding_morse_omp.o restart_mpiio.o intel_buffers.o pair_eam_intel.o pair_eam_fs_omp.o python_impl.o compute_torque_chunk.o pair.o bond_fene_intel.o angle.o fix_nh_asphere_omp.o pair_colloid_omp.o fix_freeze.o nstencil_half_bin_3d_newton_tri.o compute_improper.o fix_nph_sphere.o pair_born_coul_msm_omp.o nstencil_half_bin_2d_newtoff.o pair_airebo_morse.o pair_peri_lps.o pair_sw_intel.o pair_lj_charmm_coul_charmm_implicit_omp.o ewald_omp.o pair_yukawa_omp.o fix_qeq.o pair_brownian_omp.o pppm_disp_omp.o pair_comb3.o npair_half_multi_newton_omp.o compute.o pair_lj_cut_coul_debye.o npair_half_nsq_newton_omp.o fix_peri_neigh.o atom_vec_sphere.o dihedral_helix_omp.o fix_nph_omp.o dump_dcd.o npair_half_bin_atomonly_newton_omp.o fix_nph_sphere_omp.o fix_nh_intel.o verlet.o compute_centro_atom.o pair_lj96_cut_omp.o pair_eam_fs.o min_sd.o pair_adp_omp.o pair_lj_charmm_coul_long_opt.o compute_ti.o kspace.o compute_temp_chunk.o atom_vec_ellipsoid.o npair_half_bin_newton_tri_intel.o pair_born_coul_dsf.o pair_colloid.o pair_coul_cut.o pair_born_coul_msm.o fix_rigid_nph.o fix_rigid_omp.o compute_temp_com.o atom_vec_full.o fix_event_tad.o pair_reax.o pair_yukawa.o compute_temp_ramp.o imbalance_time.o pair_eim_omp.o pair_yukawa_colloid_omp.o nstencil_full_ghost_bin_3d.o pair_brownian.o pair_eam_alloy_opt.o msm_omp.o rerun.o npair_half_multi_newton.o fix_neb.o pair_buck_coul_long_cs.o pair_lj_gromacs_coul_gromacs.o atom_vec_atomic.o pair_brownian_poly.o npair_half_nsq_newton.o pair_tersoff_omp.o dihedral_helix.o npair_half_bin_newtoff_ghost_omp.o compute_cluster_atom.o dihedral_hybrid.o pair_comb.o npair_half_bin_atomonly_newton.o dump_atom.o fix_deprecated.o compute_orientorder_atom.o bond_zero.o pair_lj_class2_coul_long_omp.o pair_born_coul_wolf_omp.o pair_dpd_tstat.o fix_nve_asphere_intel.o atom_vec_peri.o pair_lj_cut_dipole_cut.o compute_temp_partial.o dump_cfg.o pair_coul_debye.o force.o fix_qeq_shielded.o pair_coul_dsf_omp.o dihedral_zero.o compute_slice.o pair_vashishta_table.o atom_vec_dipole.o python.o pair_eam_fs_opt.o fix_ave_atom.o bond_class2_omp.o fix_wall_lj126.o fix_nvt_sphere.o info.o npair_half_bin_newton_omp.o compute_pe_atom.o atom_vec_tri.o fix_temp_csld.o compute_gyration_chunk.o pair_lj_cut_coul_long_omp.o pair_yukawa_colloid.o dump_xyz_gz.o fix_nh_body.o fix_gravity.o irregular.o fix_rigid_npt_omp.o xdr_compat.o npair_half_size_bin_newton_tri.o npair_half_respa_nsq_newtoff.o fix_thermal_conductivity.o npair_skip_size_off2on_oneside.o fix_tfmc.o fft3d_wrap.o fix_setforce.o pair_gran_hooke_omp.o thr_data.o dihedral_charmm_omp.o min.o nstencil_half_multi_2d_newtoff.o pppm_stagger.o domain_omp.o fix_tune_kspace.o pair_lj_smooth_omp.o minimize.o fix_nh_sphere.o variable.o fix_recenter.o fix_nvt_body.o fix_wall_lj93.o fix_msst.o npair_skip.o reader.o pair_coul_dsf.o temper.o fix_box_relax.o respa_omp.o read_restart.o pair_zbl_omp.o imbalance.o bond_class2.o reader_native.o pair_nm_cut_coul_cut_omp.o pair_born_coul_wolf.o fix_wall_lj1043.o pair_nb3b_harmonic_omp.o compute_dipole_chunk.o compute_pair.o fix_npt_body.o pair_lubricate_poly_omp.o pair_lj_cut_coul_long.o fix_nh.o pair_morse.o dihedral_harmonic.o dihedral_harmonic_intel.o pair_lj_charmm_coul_long_omp.o compute_hexorder_atom.o fix_rigid_npt.o bond_morse_omp.o pair_peri_pmb_omp.o fix_aveforce.o npair_halffull_newtoff.o pair_meam.o nstencil_half_bin_2d_newton_tri.o pair_lj_smooth_linear_omp.o pair_gran_hooke.o atom_vec_body.o fix_npt_intel.o neigh_request.o compute_snav_atom.o pair_zbl.o pair_lj_class2_omp.o fix_wall_gran_region.o pair_table_omp.o improper_harmonic.o pair_lj_long_coul_long_opt.o read_data.o angle_table_omp.o compute_pair_local.o fix_enforce2d.o compute_temp_deform.o lammps.o body_nparticle.o respa.o pair_tersoff_mod_omp.o pair_nb3b_harmonic.o fix_rigid.o dump_custom.o npair_half_size_nsq_newton.o bond_fene_expand_omp.o fix_nve_intel.o fft3d.o compute_pe.o pair_lj_cut_opt.o msm.o fix_read_restart.o imbalance_group.o nstencil.o pair_tersoff.o bond_morse.o npair_skip_size.o npair_half_bin_newtoff.o bond_fene.o pair_lj_cut_tip4p_cut.o fix_nph.o pair_lj_smooth_linear.o npair_half_nsq_newtoff_ghost_omp.o compute_heat_flux.o pair_lj_cut_coul_long_opt.o dihedral_charmm_intel.o pair_coul_long_cs.o pair_lubricate_omp.o pair_eim.o pair_table.o pair_born_coul_dsf_cs.o compute_omega_chunk.o pair_lubricate_poly.o angle_table.o pair_beck_omp.o dump_xyz_mpiio.o npair_halffull_newton.o fix_ehex.o nstencil_full_ghost_bin_2d.o angle_charmm_intel.o delete_bonds.o bond_table.o pair_tersoff_mod.o pair_dpd_omp.o pair_line_lj.o fix_nphug.o region_block.o fix_rigid_nvt_small.o fix_gravity_omp.o pair_bop.o bond_fene_expand.o pair_buck_coul_cut.o fix_nvt_sllod_omp.o ntopo_improper_partial.o npair_half_nsq_newtoff_ghost.o compute_bond_local.o ewald.o compute_com_chunk.o pair_buck_coul_msm.o min_linesearch.o pair_airebo_omp.o atom_vec_hybrid.o pair_peri_ves.o nbin_intel.o pair_gran_hooke_history.o fix_press_berendsen.o fix_peri_neigh_omp.o pair_soft_omp.o pair_lj_charmmfsw_coul_charmmfsh.o fix_qeq_slater.o compute_coord_atom.o fix_reax_bonds.o fix_efield.o fix_print.o pair_lubricate.o atom_vec_template.o fix_rigid_nh_omp.o fix_wall_reflect.o nstencil_half_multi_3d_newton_tri.o ntopo_bond_template.o fix_shear_history_omp.o npair_skip_respa.o pair_lcbop.o pair_dpd.o npair_half_size_bin_newton.o pair_tip4p_cut.o pair_lj_cut_coul_cut.o dump_movie.o nstencil_half_multi_2d_newton_tri.o pair_eam_alloy.o fix_nvt_sllod.o ntopo_dihedral_all.o ntopo_improper_template.o pair_hbond_dreiding_lj_omp.o fix_tmd.o compute_property_local.o fix_momentum.o fix_nh_asphere.o pair_gran_hertz_history.o fix_store_force.o angle_cosine_periodic.o ntopo_bond_partial.o npair_half_size_nsq_newtoff_omp.o fix_store.o -lreax -lpoems -lmeam -L/opt/intel/composer_xe_2015.0.090/mkl/lib/intel64/ -lmkl_intel_ilp64 -lmkl_sequential -lmkl_core -lifcore -L/usr/lib/python2.7/config-x86_64-linux-gnu -L/usr/lib -lpython2.7 -lpthread -ldl -lutil -lm -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -lifcore -lsvml -lompstub -limf -lz -ltbbmalloc -o ../lmp_intel_cpu_intelmpi /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `PMPIX_Comm_group_failed' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPID_Datatype_builtin' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPID_Type_contiguous' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_Type_free_impl' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_Grequest_set_lang_f77' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPID_Wtime_todouble' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_CommGetAttr_fort' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_WinGetAttr' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIU_Handle_get_ptr_indirect' /opt/intel//impi/5.0.1.035/intel64/lib/libmpicxx.so: undefined reference to `MPIR_Op_set_cxx' /opt/intel//impi/5.0.1.035/intel64/lib/libmpicxx.so: undefined reference to `MPIR_Keyval_set_proxy' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPID_Type_commit' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPID_Wtick' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPI_WEIGHTS_EMPTY' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_TypeSetAttr' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_Err_create_code' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_Err_preOrPostInit' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_TypeGetAttr' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPID_Datatype_direct' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_WinSetAttr' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPID_b_use_gettimeofday' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_CommSetAttr' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPID_Datatype_mem' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_Process' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPI_UNWEIGHTED' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `PMPIX_Comm_reenable_anysource' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPID_Datatype_set_contents' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_Add_finalize' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `PMPIX_Comm_remote_group_failed' /opt/intel//impi/5.0.1.035/intel64/lib/libmpifort.so: undefined reference to `MPIR_Err_return_comm' /opt/intel//impi/5.0.1.035/intel64/lib/libmpicxx.so: undefined reference to `MPIR_Errhandler_set_cxx' size ../lmp_intel_cpu_intelmpi size: '../lmp_intel_cpu_intelmpi': No such file Makefile:92: recipe for target '../lmp_intel_cpu_intelmpi' failed make[1]: *** [../lmp_intel_cpu_intelmpi] Error 1 make[1]: Leaving directory '/home/koma/software/lammps-2017/compile/lammps-11Aug17/src/Obj_intel_cpu_intelmpi' Makefile:158: recipe for target 'intel_cpu_intelmpi' failed make: *** [intel_cpu_intelmpi] Error 2
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