stratix III kit reset

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stratix III kit reset

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Hi , i am using the Stratix 3 kit E3PSL150F1152C3 ,i put a code in it using the usb cable (usb blaster in jtag hardware )and was running good , i pressed the button Factory config , Reset config and CPU reset , and strange output appears using signaltab , i put my program again and again the weird output appears , i think the fpga keep reseting or another code runs along with my code cause i see wierd states in my FSM , did these buttons make that , or did the configuration of the board change ? , is there a way to reset it and have the configurations back to it , how to do that ?

Thanks in advance.

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