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Hi :
I will use two 16bit ddr4 controller, the readme.txt file show a example I/O assignments, if this one controller will occupy two banks, total 4 banks. Two controllers working at same frequency, I want to connect PLL reference clock signal from bank 3J to two pll_ref_clk of controller instances in top.v file, and place some DQ signals of two controllers in bank 3K, place addr and command signals of two controllers in bank 3J and 3L. So, I can place two controllers in total 3 banks. I'm not sure if it's possible to do this ?
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This is how resource sharing for EMIFs is supposed to be set up and work, so you shouldn't have an issue.
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You don't mention the target device which is absolutely key in determining whether this is possible.
In Agilex 7, this is not possible.
In Stratix 10, Arria 10, and Cyclone 10, this would be possible though the data pins would need to be split for each interface between the "outer" bank and the center bank (8 in 3L and 8 in 3K, for example).
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This is how resource sharing for EMIFs is supposed to be set up and work, so you shouldn't have an issue.
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